Nibribacter ruber: GU926_06840
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Entry
GU926_06840 CDS
T06388
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nib
Nibribacter ruber
Pathway
nib01501
beta-Lactam resistance
nib01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GU926_06840
01503 Cationic antimicrobial peptide (CAMP) resistance
GU926_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nib03036
]
GU926_06840
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nib02000
]
GU926_06840
01504 Antimicrobial resistance genes [BR:
nib01504
]
GU926_06840
Chromosome and associated proteins [BR:
nib03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GU926_06840
Transporters [BR:
nib02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GU926_06840
Antimicrobial resistance genes [BR:
nib01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GU926_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
HH_MFP_RND
BSH_CzcB
RND-MFP_C
Beta-barrel_RND
BSH_CusB
CzcB_C
Biotin_lipoyl
MlaD
HH_EMRA
HH_AAEA_pHBA
BSH_YknX
BSH_LcnD
BSH_YhbJ
SHOCT
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QHL87161
UniProt:
A0A6P1NZ72
LinkDB
All DBs
Position
1613498..1614619
Genome browser
AA seq
373 aa
AA seq
DB search
MKIKHIVYTLLILGFGALVYYRISANKELAGAGGGPGGSGKPGAGGPGGGKGGPGGGGGM
PMRVSGIVVAPQQFANSLQVTGSIEANEQVEIRGQVSGLVRSISFQEGSNVSKGQTLVKI
DDSELRAQLAQAQTKRSLTAENERRARLLLEKEAISREEYDVARADLRTAQAQIQLIQAQ
IAKTTIKAPFSGKVGLRSISVGSFLSPETVVANLVSINPIKISFSVPEKYANSVRTNTQI
QFTVAGSNEKYTATVYAIEPGIEATTRTLQLRARANNANGELRPGSFANVVLPLTTINDA
ILIPTEAVVPVQNGKKVFVSEGGKAKEVMIETTTRTEKELLVTSGLSAGDTVLTTGVMSL
KAGSPVRVAIAKN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaagcacatcgtttacactctcctgattctgggttttggagccttggtatat
tatagaatttcggcaaacaaagaattggcaggtgcaggcggcggcccaggtggcagtgga
aaaccgggtgccggcggtcccggaggtgggaaaggcggcccaggtggcggtggcggaatg
cccatgcgcgtgagcggcatagtggtagccccgcagcaattcgccaactccctgcaagtg
accggttccattgaagccaatgagcaagtagagatcagaggccaggtttctggtttggtg
cgcagcatctcgttccaggagggcagcaatgtgagcaagggccagactctggtgaaaatt
gacgactctgaactacgtgcccaactggcccaggcacagactaaacgctcacttaccgca
gaaaatgagcgcagagcccgcctcttgttggaaaaagaagccatcagccgggaagaatat
gacgtagcccgcgccgacctcagaactgcccaggctcagattcaactcattcaggcccag
attgccaaaaccaccatcaaagcgcctttctcaggtaaagtaggtttacgctctatttcg
gtgggttctttcctgtcgccagagacggtagtcgccaatttggtgagcatcaatcctata
aaaatctcgttctcagtgcctgaaaaatacgccaactctgtgcgtaccaacacgcagatt
caattcacggtggcgggttctaatgagaaatacacggctacggtatacgccattgagccc
ggcattgaagccaccacccgcacattgcagttgcgcgcccgggccaacaacgccaacggc
gagctacgtccaggttcctttgccaacgtagtgctgccccttaccactatcaatgacgcc
atcttaatccctacggaggccgtggtaccggtacagaacggcaagaaggtgtttgtctct
gaaggcggcaaggccaaggaagtcatgattgaaaccaccacccgtacagaaaaagaactt
ctggttacctctggtttaagcgccggcgacaccgtgctcaccaccggggtcatgtccttg
aaagcgggaagccccgtgcgtgtagccatagccaagaactaa
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