Nibribacter ruber: GU926_08975
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Entry
GU926_08975 CDS
T06388
Name
(GenBank) pyridoxal-phosphate dependent enzyme
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
nib
Nibribacter ruber
Pathway
nib00260
Glycine, serine and threonine metabolism
nib00270
Cysteine and methionine metabolism
nib00670
One carbon pool by folate
nib01100
Metabolic pathways
nib01110
Biosynthesis of secondary metabolites
nib01230
Biosynthesis of amino acids
Module
nib_M00035
Methionine degradation
nib_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GU926_08975
00270 Cysteine and methionine metabolism
GU926_08975
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GU926_08975
Enzymes [BR:
nib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
GU926_08975
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DUF5048
Motif
Other DBs
NCBI-ProteinID:
QHL87563
UniProt:
A0A6P1P1F6
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All DBs
Position
complement(2114954..2115934)
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AA seq
326 aa
AA seq
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MYFNNIIEAIGNTPLVKLNSVTDGIKATVLAKVEYFNPGNSVKDRMALRMVEDAEKAGIL
KPGGTIIEGTSGNTGMGLALAAIAKGYKCIFTMSDKQSQEKMDILKAVGAEVIVCPTNVS
PDHPDSYYSVAKRLNQEIPNSFYPNQYDNLSNTAAHYETSGPEIWKQTEGKITCFAAGVG
TGGTICGISKYLKEQNPDIKVVGLDTYGSVFKKYKETGIFDENEIYSYKTEGIGEDILPK
NVDFSLIDTFIKVTDKDAALMTRRLAKEEGLFVGWSCGSAVYGALEYAKEHLTEEDTLVI
VLPDHGTRYLGKIYNDAWMREQGYID
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcaacaacattatagaagccattggcaacacgcctctggtaaaactgaacagc
gtcacagacggcatcaaagctacggttctggccaaggtggagtattttaacccgggcaac
tctgtgaaggaccgcatggccctgcgcatggtggaagacgctgagaaggcgggcatctta
aagccgggcggcaccatcattgaaggaacatctggtaataccggcatgggtctggcactg
gccgccattgccaaaggctacaagtgcatcttcaccatgtctgacaagcagagccaggag
aagatggacatcttgaaagccgtgggcgccgaggtgatcgtgtgtcctaccaacgtgtct
ccagaccatccagactcctactattcagtggccaaacgcctgaaccaggaaattcctaat
tcgttctatcccaaccagtacgacaacctgtccaacaccgcggcgcactatgagaccagc
ggccctgagatatggaaacagaccgaaggtaaaatcacctgctttgcggcgggcgtaggc
accggcggtaccatctgcggcatctctaagtacctgaaagagcagaacccagacattaaa
gtagtaggcctggacacgtatggttctgtgttcaagaaatacaaagagaccggcatcttt
gacgagaacgaaatctattcttacaagaccgaagggattggcgaagacattctgcccaag
aacgtggacttctcgctcattgacaccttcatcaaagtaacggacaaagatgctgctctc
atgaccagaagactggccaaggaggaaggtttgtttgtgggttggtcttgcggttctgcc
gtgtacggcgccctggagtatgccaaagaacacctaaccgaagaagacaccctggtgatt
gtgctgccagaccacggtacccgttacctgggcaaaatctacaatgacgcctggatgcgc
gaacaaggatatattgactag
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