KEGG   Nitrosarchaeum sp. AC2: DSQ20_00315
Entry
DSQ20_00315       CDS       T06694                                 
Name
(GenBank) DNA lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
nic  Nitrosarchaeum sp. AC2
Pathway
nic03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DSQ20_00315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nic03400]
    DSQ20_00315
Enzymes [BR:nic01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DSQ20_00315
DNA repair and recombination proteins [BR:nic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DSQ20_00315
 Prokaryotic type
     DSQ20_00315
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 AGOG DUF2400 RecR_HhH Beta-prop_BT_1020
Other DBs
NCBI-ProteinID: QLH10127
UniProt: A0A7D5RB87
LinkDB
Position
51259..51906
AA seq 215 aa
MKKIIHGMMSTMNSVKPPRMTALRELHEAETGNFSILIGTILSARTKDETTTKAVKMLFS
KYKTPKELANAKVKDIEKIIRSIGFYHVKSKRIIEVSKIIDSKYNGIVPDSLDELIQLPG
VGRKTANCVLVYAFDKPAIPVDIHVHRISNRLGLVNTQSPEETELELMKKIPKKYWIKIN
DTFVMYGQNICKPINPMCNVCKIKKNCKYYTENNI
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaaaaaaattattcatggaatgatgtctactatgaattctgtaaaaccgccaagaatg
actgctttgcgagaattacatgaggccgaaacaggaaattttagtattttaattggaaca
atattgtctgcacgaacaaaggatgaaactaccactaaagcagtaaagatgttattttca
aaatacaaaactccaaaggagctagctaatgccaaagtaaaagatattgaaaaaataatc
agatccatcggattttatcatgtaaaatccaaaagaatcatcgaagtctcaaaaattata
gattcaaagtataatggaatagttcctgatagccttgatgaattaatccaacttcctgga
gtaggaagaaaaacagcaaactgtgtattagtatatgcatttgataagcctgcaattcct
gttgatattcatgtacatagaatatctaatagattggggttagtaaatacacaatctcct
gaagaaacagaactagaattaatgaaaaaaattccaaaaaaatactggattaaaattaat
gacacttttgtaatgtatggacaaaatatctgcaaacctattaatccaatgtgtaatgtt
tgtaaaattaaaaaaaattgcaaatattatacagagaataatatttaa

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