Nitrospira sp. KM1: W02_24020
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Entry
W02_24020 CDS
T08344
Name
(GenBank) RND efflux system, membrane fusion protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nif
Nitrospira sp. KM1
Pathway
nif01501
beta-Lactam resistance
nif01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
W02_24020
01503 Cationic antimicrobial peptide (CAMP) resistance
W02_24020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nif03036
]
W02_24020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nif02000
]
W02_24020
01504 Antimicrobial resistance genes [BR:
nif01504
]
W02_24020
Chromosome and associated proteins [BR:
nif03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
W02_24020
Transporters [BR:
nif02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
W02_24020
Antimicrobial resistance genes [BR:
nif01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
W02_24020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
HH_EMRA
BSH_CzcB
HH_YBHG
BSH_CusB
CzcB_C
Beta-barrel_RND_2
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
BCA55262
LinkDB
All DBs
Position
2525665..2526810
Genome browser
AA seq
381 aa
AA seq
DB search
MDRTLMRVSPFRMLIGSWLMIAALASGCKGEAGSAASRPTPEVQVVDIAPQTVPDEPELI
GQAEASSIVEIRPQVTGIMKQRYFSEGRDVKKGDRLYEIDPVPFKAAEISAKARVSQAEA
RLVQAKQDLARVKPLLAEEAVSQKDVDDAIAENLAAKAALEAAKGDLVKAQFDLDNTLIV
APIDGLIERTRFYQGRLVTAQTDLLTIIHQVDPMYVIVSAPESFLLKRRRDILSRRITHP
GIYKLTGTIIFVDGTTYSHEGILDFADVSLRAETGSRQARVVFPNPDRVLLPGQFVTVRF
HGVSKPNTILVPQRAVQQGPKGQVVYVVGKDDQVEVRDVKATDWQGDQWLIEEGLHPGER
VMVEGFQRIAPGTKVKPVAAS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggataggactctgatgcgcgtcagcccgtttcgtatgctgattgggtcgtggctcatg
attgcggccctcgcatccggatgtaaaggggaagcagggtcggctgcctcccgtccgacc
ccggaagtgcaggtggtcgatattgctcctcagaccgtaccggatgagcctgagctgatc
ggccaggcagaggcgtccagcatcgtcgagattcggccgcaggtgaccggtatcatgaag
caacgatatttctcagaaggacgcgacgtcaagaaaggcgaccgcctgtatgagatcgat
ccggtgcccttcaaggccgccgagatcagcgccaaagcgagagtgagtcaggccgaggcg
cgcctcgtccaagccaagcaggacctggcgcgggtgaaaccgctcctcgctgaagaagcc
gtcagtcaaaaagacgtcgacgacgcgatcgcggaaaatctcgcggccaaagccgccttg
gaagcggccaagggcgatctcgtcaaagcccaattcgatctcgacaataccctcatcgtc
gcccccatcgacggcctgatcgagcgcacccgcttctatcaggggcgattggtgaccgct
cagaccgaccttctcaccatcatccatcaagtcgatccgatgtacgtgatcgtcagcgcc
cctgaaagttttttgttgaagcgccgacgagacatactctctcgtcgcatcacgcacccg
ggaatctacaaactcactggcacaatcatcttcgtcgatgggaccacgtattcccacgaa
gggatcttggattttgcagacgtcagtttacgggcggaaacaggctcacggcaggcccgt
gtcgtctttccaaatcctgatcgggtgctcttgcccggtcagttcgtcacggtacggttt
catggagtatcgaagcccaacactattctcgttccgcagcgggcagttcagcagggaccg
aaaggccaggttgtctatgtcgtcggcaaagacgatcaggtggaagtccgcgacgtgaag
gcgaccgattggcagggtgatcaatggctgatcgaagagggcctccatccgggcgaacga
gtcatggtggaaggattccagcgcatcgctccgggaaccaaagtcaagccggtagccgcc
tcctga
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