Nitrospira sp. KM1: W02_40330
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Entry
W02_40330 CDS
T08344
Name
(GenBank) MexE family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nif
Nitrospira sp. KM1
Pathway
nif01501
beta-Lactam resistance
nif01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
W02_40330
01503 Cationic antimicrobial peptide (CAMP) resistance
W02_40330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nif03036
]
W02_40330
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nif02000
]
W02_40330
01504 Antimicrobial resistance genes [BR:
nif01504
]
W02_40330
Chromosome and associated proteins [BR:
nif03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
W02_40330
Transporters [BR:
nif02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
W02_40330
Antimicrobial resistance genes [BR:
nif01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
W02_40330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
BCA56893
UniProt:
A0A679I109
LinkDB
All DBs
Position
4198001..4199101
Genome browser
AA seq
366 aa
AA seq
DB search
MSASPPDVLVTEVVRRDVPVIVEGIGTTAGMVDAQIRAKVQGYLLSRNYIEGAYVKTGDV
LFKIDARPYQASFDQMKGELARAEAAYKKTKLDVARDTPLAKQGAVSQKELDDSIQANEA
NKASVYSAKANLDKAKLNFDWTTIMSPVNGVAGIANAQIGDLIMENTILTTVSQVDPIKV
LFPISEKMYLRFADRIQKVAADPMGDHPNRPELELILTDGTVYPHKGKVALADRQVDTKT
GTITIVSYFPNPGNVLRPGQYAKVRATIETLREALLIPQRAVQELQGSYHVAVVETDNKI
AVKSVKPGVRIGTQWVITSGLNPGEQVVVEGLQKVRSGVVVSPKPVPPEPPITDTEAISP
STRAGT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcctcgcctccggatgtgctggtgacggaagtcgtccgtcgagacgtgcccgtc
attgtggaaggtatcggcaccactgccggcatggtggatgcgcagatccgcgccaaggtg
caaggctatctgctttcgcgcaactacattgaaggggcctacgtcaaaacaggcgatgtc
ctcttcaagatcgatgcgcgtccttatcaggcctcgttcgatcaaatgaagggggaactc
gcacgggcggaagcggcgtacaagaaaacgaagctcgatgtggcgcgtgatactcctctc
gccaaacagggtgccgtcagtcaaaaagagttggacgattccattcaagccaatgaggcc
aacaaggcttcggtctattctgccaaggccaatctcgacaaggccaagctgaacttcgac
tggacgaccatcatgtcgccggtgaacggggtggccggcatcgccaacgcgcaaatcggc
gacttgatcatggagaatacgattctcacgaccgtatcgcaggtcgatcccatcaaggtg
ttgtttcccatcagcgaaaagatgtatttgcggttcgccgaccgcatccaaaaggtcgct
gccgatccgatgggtgaccacccgaaccggccggagctggagctgattctgaccgatgga
acggtatatccccacaaggggaaggtggcgcttgccgaccgacaggttgatacgaagacg
gggacaatcacgatcgtcagctactttccgaaccctggaaacgtgctgcgtcccggccaa
tatgcaaaggtacgagcgacgatcgagacgcttcgggaagccttgctcatcccgcagcgc
gccgtgcaggagcttcaaggcagctatcatgtggcggtggtggaaaccgacaacaagatc
gccgtcaagagcgtgaagcccggtgtgcgcatcgggacgcaatgggtcatcaccagcggg
ttgaatcccggagagcaggtcgtcgtcgaagggctccagaaagtccgcagcggggtcgtg
gtctcccccaagcccgttcctcccgaacctcccatcacggatactgaggccatttctccg
tcaacccgcgccggaacctag
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