Nitratiruptor sp. YY08-10: NitYY0810_C0266
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Entry
NitYY0810_C0266 CDS
T10768
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nih Nitratiruptor sp. YY08-10
Pathway
nih00300
Lysine biosynthesis
nih00550
Peptidoglycan biosynthesis
nih01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nih00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NitYY0810_C0266
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NitYY0810_C0266
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nih01011
]
NitYY0810_C0266
Enzymes [BR:
nih01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NitYY0810_C0266
Peptidoglycan biosynthesis and degradation proteins [BR:
nih01011
]
Precursor biosynthesis
Amino acid ligase
NitYY0810_C0266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BCD59522
LinkDB
All DBs
Position
225841..227115
Genome browser
AA seq
424 aa
AA seq
DB search
MIYQFDNITVTDHSKSIQDADYFLITQQNRQYAADIPNAKIIIPRDLINQYELNTIKTVG
VTGTNGKTTTAAAIYSYLNDLGFTAALQGTRGFFIGDEQIEKKSLTTPPILQTLYHMYTA
KQQGATHFVMEVSSHAIAQKRIEDLQFALKVFTNISQDHLDYHKTMQNYIATKSSFFMDE
GSKLINKDDKHIQYNPKGARTYSVEELATYQILAYSMQNGISAVLRFGNEMIDFHAPMIG
LFNLYNITAAISAVHMLTNLPLQQICEVTEHFAGVRGRMQILSEEPLIIVDFAHTPDGMQ
KVFESFPGRKIVALFGAGGDRDRSKRALMGNIASRFCTKIYLTSDNPRSEHPKEIIEDIA
KGIETDVHVEKIVDRKEAIEQAIRALQTDEILLILGKGDEEYIEYNGKKIPYSDVDTVQS
LLKS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaatttgacaatataactgtcacggaccattccaaatccattcaggatgcg
gactattttctaattacacaacaaaaccgacaatatgccgcagatataccaaacgcaaaa
attataatccctcgggatttgatcaatcagtatgagttgaatactataaaaaccgtcggt
gttacaggaacaaacggaaaaaccactacagctgctgcaatctattcatatctcaatgat
cttggttttacagcagctttgcaaggaacgagaggtttttttataggtgatgagcaaata
gaaaaaaagtctttgacgactcctccaatcttacaaaccctctatcatatgtatactgca
aaacaacagggagctacacattttgtcatggaagtcagttcccatgcgattgcgcaaaag
agaattgaagatcttcaatttgcactgaaagtttttaccaatatttcgcaagatcactta
gactatcataaaaccatgcaaaactatatcgctacaaaaagcagtttttttatggatgaa
gggtcaaaactcattaacaaagatgataagcatatccaatacaatcccaagggtgcaaga
acatacagcgttgaagagcttgctacgtatcagatcctggcctattcaatgcaaaacggg
atcagcgccgtacttcggtttggcaatgagatgatcgattttcatgcaccaatgattggt
ctattcaatctctataacattaccgctgcaataagtgcagtgcatatgttgacaaacttg
cctttgcagcagatttgtgaagtaacagaacattttgccggtgttagagggcgaatgcag
attctgagcgaagaaccgcttatcatagttgattttgcgcatactcctgatggtatgcaa
aaagtctttgagagctttccgggcagaaaaatagttgcactttttggtgcagggggggat
agagacagaagtaagcgggcgctgatgggcaatatagcgagcagattttgtacaaaaatc
tatcttacttcagataatccacgaagcgaacatccaaaagagattatcgaagatattgca
aaaggaattgagacggatgtccatgtagaaaaaattgttgatagaaaagaggcgatagaa
caagcgattcgtgcattgcagacagatgaaattcttctaattcttggaaaaggggatgaa
gagtatatagaatacaacggaaaaaaaatcccgtatagcgatgttgatacagtacagtct
cttttgaaaagttaa
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