Niabella insulamsoli: ABDK00_003615
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Entry
ABDK00_003615 CDS
T11434
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nij Niabella insulamsoli
Pathway
nij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABDK00_003615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nij03400
]
ABDK00_003615 (nth)
Enzymes [BR:
nij01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABDK00_003615 (nth)
DNA repair and recombination proteins [BR:
nij03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABDK00_003615 (nth)
Prokaryotic type
ABDK00_003615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
XTN42118
LinkDB
All DBs
Position
833086..833727
Genome browser
AA seq
213 aa
AA seq
DB search
MTKKERYRFVIDYFSVHMPEPETELVYDNPYQLLVAVILSAQCTDKRVNMVTPFIFEKYP
DIESLAGASVETVFPLIKSISYPNNKSKHLVGMAQKVLSEFEGEIPMTVNELVTLPGVGR
KTANVITSVVQQQPNMAVDTHVFRVSKRIGLVSVKASTPLAVEKELVKNIDTALIHKAHH
WLILHGRYTCLARNPKCRECGLQQACLWFQRNN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaggaacgctatcgctttgtaattgattatttttcggtccacatgcccgag
cctgaaacggaactggtatatgataatccataccagttgctggttgccgtcatcttatct
gctcaatgcacggataagcgcgtgaacatggtgacgccctttatcttcgaaaaatatccg
gacattgaaagtcttgcgggggcgtccgtagaaacggttttccctttaataaaaagtatt
tcatatcctaataacaaaagcaaacatctcgtcgggatggcgcagaaagtgcttagcgaa
tttgaaggtgaaataccgatgacggtaaatgagttggtgacgctgccgggcgtaggccgg
aaaaccgccaacgtgatcacatcggtagtacaacaacaaccgaatatggccgtcgatacg
catgttttccgcgtcagcaaaaggatcggcctggtaagcgtgaaagcttccacgccgtta
gccgtcgaaaaagaacttgttaaaaatatagacactgcacttattcataaggcgcatcac
tggttaattcttcatggccgctacacctgtctggcgagaaatcccaaatgccgcgaatgt
ggcctgcagcaggcctgcctgtggtttcaaagaaataattaa
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