Niabella insulamsoli: ABDK00_006370
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Entry
ABDK00_006370 CDS
T11434
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nij Niabella insulamsoli
Pathway
nij01501
beta-Lactam resistance
nij01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nij00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABDK00_006370
01503 Cationic antimicrobial peptide (CAMP) resistance
ABDK00_006370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nij03036
]
ABDK00_006370
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nij02000
]
ABDK00_006370
01504 Antimicrobial resistance genes [BR:
nij01504
]
ABDK00_006370
Chromosome and associated proteins [BR:
nij03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ABDK00_006370
Transporters [BR:
nij02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ABDK00_006370
Antimicrobial resistance genes [BR:
nij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABDK00_006370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND_2
BSH_CzcB
HH_MFP_RND
BSH_CusB
YknX_C
CzcB_C
BSH_YhbJ
Biotin_lipoyl
KH_PARP14_8
Motif
Other DBs
NCBI-ProteinID:
XTN42647
LinkDB
All DBs
Position
1483082..1484140
Genome browser
AA seq
352 aa
AA seq
DB search
MTLRPFYNAACVAAIVFSFFSCGSGKDKAEKKTAQKKAPPTLEGYIVRAEPFSEIIEVPG
SVVANEVTDIRPEVSGRLVRLHISEGQTVGKGALLAKIYDGDLQAELKKLQSQLAIAESN
EKRASRLLDIQGISRNDYESTLLNLNNIRADIDVIKTQIYRTEIRAPFAGKLGLRNISPG
AYVSPADVIATINQVSALKLDFSIPEKYIGSIGVGQYVNFTVQGIDDVFAAKVYATASNV
GLNNRSLQVRARVSGNNQRLVPGSFAKVRIGFEPDNNAIFIPSQSLVPTIKGKQVILYQG
GKAIFHDVAIGARDSARVEIVEGLKVGDTILTTGIMTTVPNAPIRLGKIDKN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactctacgacccttttataatgctgcttgcgtggctgcgattgtctttagtttcttt
tcctgcggttcggggaaagataaagccgaaaaaaaaaccgcgcaaaaaaaagcgccgcca
acacttgaaggctatattgttcgtgccgaaccattctcagagattattgaagtccctggt
tcggtagtcgccaacgaggtgaccgatatccggcccgaagtttcaggccgcctggtgcgg
cttcatatttcagaagggcaaaccgttgggaaaggcgctttgctggctaaaatttatgac
ggcgacttgcaggcagagctaaaaaagctgcaatctcaattggctatcgccgaaagcaat
gaaaagcgggcctcccgtttgttagatattcagggtattagccgcaacgattatgaaagc
acattgctgaacctcaataatatccgcgccgacattgatgtcataaaaacccagatctac
cgaacggaaatacgggcgccttttgccggcaagctgggcctgagaaatataagcccgggc
gcttatgtaagccctgcagatgtcatcgctaccattaaccaggtgagcgctcttaagctc
gatttttctattcccgaaaaatatatcggaagtattggtgtgggccaatatgtaaatttc
accgttcagggcatcgatgatgtttttgcggccaaagtttatgcaacagcatcaaacgtg
ggtttaaataacaggagtcttcaggtaagggcgcgcgtttcgggcaataatcaaaggctt
gttcccggaagttttgccaaagtgaggattggttttgagcctgacaataatgccatcttt
attccttcccaatcgttggtgccgactattaaaggaaagcaggtaatcctttatcaaggc
ggcaaagcgatttttcatgatgtggccattggcgcgagagactcggctcgcgtggaaatt
gttgaaggattgaaagtgggcgacacgatattaacgaccggcattatgacaaccgttcca
aacgctcccatcaggttgggcaaaatagataagaattaa
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