Nitrincola iocasae: F5I99_02020
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Entry
F5I99_02020 CDS
T06212
Symbol
dmpG
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
nik
Nitrincola iocasae
Pathway
nik00362
Benzoate degradation
nik00621
Dioxin degradation
nik00622
Xylene degradation
nik00984
Steroid degradation
nik01100
Metabolic pathways
nik01120
Microbial metabolism in diverse environments
nik01220
Degradation of aromatic compounds
Module
nik_M00569
Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F5I99_02020 (dmpG)
00622 Xylene degradation
F5I99_02020 (dmpG)
00621 Dioxin degradation
F5I99_02020 (dmpG)
00984 Steroid degradation
F5I99_02020 (dmpG)
Enzymes [BR:
nik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
F5I99_02020 (dmpG)
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
F5I99_02020 (dmpG)
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GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
Motif
Other DBs
NCBI-ProteinID:
QEW05367
UniProt:
A0A5J6LA30
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All DBs
Position
complement(409743..410771)
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AA seq
342 aa
AA seq
DB search
MNLKGRSVRLHDMSLRDGMHAKRHQISLEQMVSIASAMDEAGMPLIEVTHGDGLGGASVN
YGFPAHSDEAYLNAVIPQMKQAKISALLLPGIGTVDHLKMARDCGVHTIRVATHCTEADV
SQQHIGMAAKMAMDTVGFLMMAHMASAEKILEQAQLMVSYGANCIYCTDSAGYMLPDEVT
QKIGLLRAELPSQIEIGFHGHHNMAMGVANSLAAIEAGAARIDGSVAGLGAGAGNTPLEV
LVAVLERMGCSSGVDLYKIMDVAEDLITPMMDQPIRVDRDALTLGYAGVYSSFLLFAKRA
EKKYGIQARDLLVELGRRGTVGGQEDMIEDLAMTMAKQQGLL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaagggtagatcagttcgcctgcacgatatgagcttgcgtgatggcatgcat
gccaaacgtcaccagatttcactggagcagatggtcagtatcgcgagtgcgatggatgag
gccggaatgcctttgattgaagtcacacacggcgacggccttggcggcgcatccgttaac
tacggtttcccggcacacagcgatgaagcctacctgaacgccgttattccgcagatgaaa
caagccaaaatatcggccctgttgctacccggtataggcacagtcgatcatctgaagatg
gccagagactgcggtgtgcataccatccgagttgccacccactgcactgaggcggatgtt
tcgcaacagcatattggcatggcagccaagatggcaatggatactgtcggtttcctgatg
atggcccacatggcgagtgctgaaaaaatactcgaacaggctcagcttatggtgagctac
ggcgctaattgtatctattgcaccgattcagccggttatatgctgccggatgaagtgaca
cagaagataggcctgctgcgtgctgagttaccgagccagatcgagataggttttcacggt
catcacaatatggcaatgggtgtggctaactcattggcggcaattgaagctggggcagcg
cgtatcgacggatcggtcgcgggtctaggtgctggagcaggcaataccccgttagaagtg
ctggtggcagtgttggaacgtatgggctgcagcagtggtgttgacctgtacaaaatcatg
gatgtagccgaggacctgattacgccgatgatggatcagccaatccgggttgatcgcgat
gcactgacgttaggctatgccggggtatacagctcgttcttgctgtttgccaagcgggct
gagaagaaatacggcatacaggcacgtgatcttctggtagaactgggacgtcgcggtact
gttggaggacaggaggatatgattgaagatttggcaatgacgatggcaaaacagcaaggc
ctcctctga
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