Nitrincola iocasae: F5I99_17030
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Entry
F5I99_17030 CDS
T06212
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nik
Nitrincola iocasae
Pathway
nik01501
beta-Lactam resistance
nik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F5I99_17030
01503 Cationic antimicrobial peptide (CAMP) resistance
F5I99_17030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nik03036
]
F5I99_17030
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nik02000
]
F5I99_17030
01504 Antimicrobial resistance genes [BR:
nik01504
]
F5I99_17030
Chromosome and associated proteins [BR:
nik03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F5I99_17030
Transporters [BR:
nik02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F5I99_17030
Antimicrobial resistance genes [BR:
nik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F5I99_17030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QEW08059
UniProt:
A0A5J6LHH8
LinkDB
All DBs
Position
complement(3699808..3700884)
Genome browser
AA seq
358 aa
AA seq
DB search
MIGSRYSVYLTRFVTLLLCGLLLIGCDQQSVQGNQASRVERAHLVELHQVTEDVVKLDRI
RTGTLRATVKYRLFVQEEGQIAELPWYPGDQVSRGDLLIALDDSLLRSQVARSRAELQRA
ERDLERVRSLSQRNLISVEELQRRETELEIARAELAILTTRLGYTRMSAPFAGVVTERLS
EPGNFAAKNTHLLTLIDPTSLVIDVQLSEQVMTHLQLGDSVTIQLDALGPQDFAGQITRI
YPQVDPLTRRGQVEIQPDPIPAGAVPGQLARVSLSARLQERMMIPFSALRYDQGEYVYLM
NAQQRIEKRAITTGVRVADRIEVLNGLEADDQIVIRGFMGLTENQVVKPVTPLAERES
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatagggagtcgctatagcgtgtacctgacgagattcgttactttactcttgtgcggg
ttactgttgatcgggtgtgatcagcagtcggtacagggcaatcaggcatcccgcgtggag
cgtgcacatctggtggaattgcaccaggtgacagaagacgtggtgaaactggacagaata
cgtaccgggaccctgcgggcgacagttaagtatcgtttgtttgttcaggaagaaggtcag
attgctgagctgccctggtatcccggtgatcaggtcagccgtggggatcttctgattgcg
ctggatgacagtctgttgcgttcacaggttgcccgcagtcgagcggagttgcagcgagcc
gaacgtgatctggaacgggtgcgttcactgtcacaacgtaatctgatctctgtagaagag
ttgcagcgtcgcgaaaccgaattggaaattgcacgggctgagctggctattctgacaacc
cgtctgggttacacccgcatgtcggctccctttgccggggtcgtgacagaacgtttgtcc
gagccaggtaacttcgcggccaaaaacacccatttactcaccttaatcgacccgacgtcg
ctggttattgatgtgcagttgtctgagcaagtgatgactcacttgcagttgggcgacagc
gtcactatacagttagatgccttgggaccgcaggattttgccggtcagattacccgtatt
tatccccaggttgacccactgacacgccgtggtcaagttgaaattcaaccggatcctatc
ccggcgggtgccgtacccgggcaactggcgcgtgtcagcctgtcagccaggttgcaggag
cgtatgatgattccattttccgccttgcgttatgatcagggggagtatgtctacctgatg
aatgcgcagcagcgtatcgaaaagcgagcgatcacaacgggcgtacgggtggcagatcgt
attgaagtcctgaatggccttgaagcggatgatcagatcgttattcgcgggtttatgggg
ttaacggaaaatcaggtggtaaagcccgttacgcccctggctgagcgggaatcctga
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