KEGG   Candidatus Nitrotoga sp. AM1P: W01_09250
Entry
W01_09250         CDS       T06613                                 
Symbol
casD
Name
(GenBank) type I-E CRISPR-associated protein CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
nim  Candidatus Nitrotoga sp. AM1P
Brite
KEGG Orthology (KO) [BR:nim00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nim02048]
    W01_09250 (casD)
Prokaryotic defense system [BR:nim02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    W01_09250 (casD)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: BBJ22998
UniProt: A0A455X2B3
LinkDB
Position
1075665..1076321
AA seq 218 aa
MYSFLILKLDGVMQAWGDHTYEDYRPTVNFPTRSGLLGLLAACMGIERSDVAGLAELDKS
LCFSIRADSEKTIKLTDFHTVMNARKVDIRKSGEYPVVSRREYLCDAKFTVAIGLSEHTS
VTFDTIQRALKQPVYTPVLGRRSCPISRPLLVHTMEAVDALAALAQFEPNQGTIYTDSPA
LRNDRQIRLRDVPRHARVRQFATRMVSVYPKGSTHVPE
NT seq 657 nt   +upstreamnt  +downstreamnt
atgtattcatttctcatcttgaaactggatggtgtgatgcaagcgtggggtgaccacact
tacgaggattaccgtccgacggttaatttccctacacgttccggtttgctcgggctgctt
gccgcttgcatgggtattgagcgttcggacgtggcgggattggccgaactggataaaagt
ctatgctttagtattcgtgcagattcagagaagacaatcaagctgactgattttcatacc
gtgatgaatgctcgcaaagtcgatattcgtaaatcgggtgaatacccggttgtgtcacgc
cgcgaatatctttgtgatgctaaattcacggtggcgattggactgagtgaacataccagc
gtcacgtttgacaccattcagcgtgcactgaaacaaccggtctacaccccagttcttggt
cgtcgatcctgcccgatttcccgtccattgctggttcacactatggaagcagtagatgca
ctggccgcgttggcgcagtttgaaccgaatcaggggacgatctataccgattcacccgca
ttgcgcaatgatcggcagattcgtctgcgcgatgtaccacgacatgcgcgtgtgcgtcag
tttgctacccgaatggtgtctgtctatccgaaagggagcactcatgtacctgagtaa

DBGET integrated database retrieval system