Candidatus Nitrotoga sp. AM1P: W01_19580
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Entry
W01_19580 CDS
T06613
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00300
Lysine biosynthesis
nim00550
Peptidoglycan biosynthesis
nim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
W01_19580 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
W01_19580 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nim01011
]
W01_19580 (murE)
Enzymes [BR:
nim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
W01_19580 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
nim01011
]
Precursor biosynthesis
Amino acid ligase
W01_19580 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Pil1
Motif
Other DBs
NCBI-ProteinID:
BBJ24031
LinkDB
All DBs
Position
complement(2220946..2222475)
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AA seq
509 aa
AA seq
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MSFHPDLIASLGVKITRLVTDSRAVTPGDTFIAYPGSKADGRQFIKQAIANGANAVIWEA
LGFSWNEAWQLPNLAVANLHHHAGEIADHVYGSPSQKMWVIGITGTNGKTSCCHWIAQSF
CALGKKIALIGTLGNGFHAALQPTLNTTPDAIRLHELLADYLAQDAQAVAMEVSSHALEQ
GRVNGVQFDVALLTNLSRDHLDYHGDMHSYAAAKRRLFDWQQLKYVVLNLDDAFGAEIAE
QLQDKGVEVVGYGLNDAALALAERLGLRMVYGSALHMDRQGFSLQIHSSWGGGELHNTLI
GRFNVANLLGVMAVLLVSGVTLSNALHELSRISAVPGRMQTFSENGLPTVVVDYAHTPDA
LEKVLQAVREVVGREIVETDNGKLICVFGCGGDRDRGKRPMMGAIAAKLADVSIITSDNP
RSEAPLDIIAAIVSGITSGRRETNGTYQIIEDRASAIAQAVLSAHATDIVLIAGKGHESY
QEVRGVKYPFNDAEVAQRALLAWRDEARA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttccatcccgaccttattgcctccctcggcgtcaaaatcacacggctagtgacg
gatagccgcgcagttacgccaggcgatacattcatcgcctaccccggcagcaaggcagat
ggacgtcagttcattaagcaagctatcgcaaatggtgccaatgcggtgatctgggaagcg
ctcggcttcagctggaacgaagcatggcaacttcccaatttggcagtcgccaatctgcac
catcatgccggagagattgctgatcatgtctatggcagcccctcgcaaaaaatgtgggta
attggtatcaccggcaccaatggtaagacatcatgctgccactggattgcccaatcattt
tgcgcactgggcaaaaaaattgcgctgatcggaaccttaggcaacggctttcacgctgct
ttgcaacccaccctgaacaccacacccgatgccatccgcctgcatgaattattagccgat
tatctcgctcaggacgcacaggctgtcgcaatggaagtgtcctcacatgctttggaacag
gggcgggtgaatggggtgcaattcgatgtagcgctgcttaccaacctcagccgggatcat
cttgattatcacggcgacatgcatagctatgctgcggccaagcgccgtttattcgattgg
caacagcttaaatacgttgtactcaacctggatgatgcattcggtgccgagattgccgaa
caactgcaggacaaaggcgtggaagtggtgggctacggtctaaacgatgccgccttggcc
ctggccgagcgcctaggtttgcgtatggtttacggtagcgcattacatatggataggcag
gggttcagcctgcaaatacattccagctggggcggtggtgagctacataacacactgatc
ggacgctttaatgttgccaatctgttaggcgtgatggcggtgttgctagtgagcggcgtg
acgttaagcaatgcgctgcacgaattgtcgcgtatcagcgcggtgcccggacgcatgcag
acttttagtgagaatggtctccccactgtagtggtggactatgcacataccccggatgcg
ttggaaaaagtgttacaggccgtgcgtgaagtggtcggacgtgaaatagtcgagactgat
aacggcaaactgatttgtgtgtttggttgtggcggcgatcgcgaccgcggtaaacgtccg
atgatgggcgctattgcagccaaattggcggacgtctctattattaccagcgacaacccg
cgcagtgaagcgccgctcgacattattgcagccattgtatccggcattacatcgggaaga
agagaaacaaacggcacctaccaaatcatcgaagatcgcgcctcggccatcgcacaagcc
gtgctcagcgcgcatgcgacggatatcgtactgatcgccggtaaagggcacgagtcatat
caggaagtcagaggagtgaaatatccgttcaacgacgccgaggtcgcacagcgcgcgttg
ttggcttggcgcgatgaggcgcgggcatga
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