Candidatus Nitrotoga sp. AM1P: W01_23120
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Entry
W01_23120 CDS
T06613
Symbol
PatB
Name
(GenBank) cystathionine beta-lyase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00270
Cysteine and methionine metabolism
nim00450
Selenocompound metabolism
nim01100
Metabolic pathways
nim01110
Biosynthesis of secondary metabolites
nim01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
W01_23120 (PatB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
W01_23120 (PatB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nim01007
]
W01_23120 (PatB)
Enzymes [BR:
nim01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
W01_23120 (PatB)
Amino acid related enzymes [BR:
nim01007
]
Aminotransferase (transaminase)
Class II
W01_23120 (PatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BBJ24385
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All DBs
Position
2611723..2612895
Genome browser
AA seq
390 aa
AA seq
DB search
MSSSFDRDINRSDTASVKYDGRKNMFGTSEVIPLWIADMDFAAPPAVTRALAERAAHPVY
GYTQYPDSLYESLIDWLRRRHGWEVQREWIMMCPGVVPSLHAAIMAFAEPGESVIVQPPV
YFPFFSAVTNTGRKLLQNPLHLENDHYAIDFDHLEQCAAQARLLLLCSPHNPVGRVWRKP
ELKRLLQIAKKYDLLIFSDEIHADLIYPENKHTTLAMLAENPAHILTAVAPSKTFNVPGL
NLSALMVPDPKYRAAITQIFDRMHISASNPFSIVAFEAAYREGEAWLDELLAYLRDTRDY
VENYLAAHLPKIRLIKPEGTYLLWLDCRALGMNDAQLKHFFVYAAGVGMSPGVLFGEGGS
GFMRMNIGAPRHVIVAALENIRKAEREAER
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagcagttttgaccgcgacatcaatcgttccgataccgccagtgtcaaatatgac
gggcggaaaaacatgtttggcacaagcgaagtcatcccgttgtggattgctgatatggat
tttgccgccccgcccgccgtgacccgtgccctcgctgagcgcgccgcccatcccgtgtat
ggatacacccagtatccggacagcttgtacgaatcgctgatcgattggcttaggcgccgc
cacggttgggaggtacagcgcgagtggatcatgatgtgtcccggcgtagtgccttcgctg
cacgccgctatcatggcttttgctgagccaggtgaatcggtaatcgtacagccgcccgtg
tattttccatttttttcggcggtcacaaataccggtagaaagctgctacaaaatccgttg
cacctggagaacgaccactatgccatcgatttcgaccacctggaacagtgtgcagcacag
gcgcgtttgctgttgctatgttcaccgcacaacccggttggcagggtatggcgcaagccc
gaattgaagcgcctcctgcaaatcgcaaaaaaatacgatctgctcatattttcagacgaa
attcacgctgatttgatctaccccgaaaataaacacaccacgcttgcgatgctggcagag
aacccagcccacatcctcactgccgtcgcacccagcaaaacattcaatgtcccagggctg
aatctttccgcactcatggtgccggatcctaagtatcgtgcggctatcacccaaatattt
gacagaatgcacatcagtgcatccaatccctttagtatcgtcgctttcgaagcagcctac
cgggaaggcgaggcatggcttgatgagttactggcctatctgcgggatacgcgagattac
gtcgagaattatctggccgcccatcttccgaaaattcggcttatcaaaccagagggtacc
tacctgttatggcttgattgccgtgcactaggtatgaacgatgcgcaactcaagcatttc
tttgtgtatgcagcgggtgtgggcatgagtcccggtgttctgtttggcgagggcggtagc
ggattcatgcgcatgaatatcggcgcacctcgccatgtcatcgtggctgcccttgaaaat
atcaggaaagcggaacgtgaagccgagcgatga
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