Candidatus Nitrospira inopinata: NITINOP_1639
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Entry
NITINOP_1639 CDS
T04169
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NITINOP_1639 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nio03400
]
NITINOP_1639 (nth)
Enzymes [BR:
nio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NITINOP_1639 (nth)
DNA repair and recombination proteins [BR:
nio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NITINOP_1639 (nth)
Prokaryotic type
NITINOP_1639 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CUQ66614
UniProt:
A0A0S4KVS9
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All DBs
Position
1:complement(1577467..1578126)
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AA seq
219 aa
AA seq
DB search
MRQDEIHAAIRIVRREIRRWREPVVGVVARQSNRDPFLILISCLLSLRTKDKTTQEAGDR
LFALACTPAAMLKLPLKTIERAIYPVGFYRTKAKSIHRICRLLLTKYEGRVPDSIDELLT
LPGVGRKTANLVVTVGYGKPGICVDIHVHRISNRWGYIKTKTPEESEQALRRVLPRRYWI
TYNDLLVPYGQNLCLPVSPLCSQCKLAPYCDRVGVTKSR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaggacgagatccacgcggcgattcggatcgtacggcgtgagattcgccggtgg
cgggagcctgtcgtcggcgtcgtcgctcggcaatcgaatcgcgatccttttctcatcctc
atctcttgcctcctgagtctgcgaacgaaggacaagacgacccaggaggccggcgaccga
cttttcgccttggcctgcacgccggcggccatgctcaagctgcctctcaaaaccatcgaa
cgagccatctacccggtcggcttctaccgcaccaaagccaaatcgattcaccggatctgc
cgcttgctcctcaccaaatatgaagggcgggtgcctgattccatcgacgaactcctcacc
ttgccgggagtcggacgaaagacggccaacctggtggtgacggtgggctacggcaagccc
ggcatttgcgtcgatatccacgtccatcgcatcagcaaccgctggggctatatcaaaacc
aagacgccggaagaaagcgaacaggccctccggcgcgtcctcccacggcgttattggatc
acctacaacgacctgctcgtcccctacggccagaacctgtgtttgccggtctctcctctg
tgcagccagtgcaaactcgccccctattgcgaccgcgtgggcgtgaccaaaagtcgctag
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