Nymphalis io (European peacock): 126773179
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Entry
126773179 CDS
T08495
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126773179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niq03019
]
126773179
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126773179
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
PTP_N
Motif
Other DBs
NCBI-GeneID:
126773179
NCBI-ProteinID:
XP_050349861
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All DBs
Position
2:8845747..8848796
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AA seq
445 aa
AA seq
DB search
MNNKDNFSEDIFEYIKVSEDEDDSNAVEIPCELDGTLLLSTLVAQFPGACGLKYRHPDSK
TIRGIRLSDGKLHPPSEQGWAKLLFICVFPKENKRKMEDVSPENSAAKTKRLEKKLTCSD
LICLGLPWKSTEESIKQYFEKFGEVVMVQLKRDKNGLFKGFGFIRFATYASQMRALAQRH
NIDGRWVDVRIPNSKEGVVPQMPCKVFVGRCTEDMTADDLREYFSKFGEVTDVFVPRPFR
AFGFVTFLDPEVAQSLCGEDHVIKGASVSVSSAAPKIKSKSNPNWKDDSYGPNNWEGNRS
GPSGGSNGSGSNNNIDTLNMQNLGINPNGGPPANFNLPISLVAAALNQAGWGGFLGGPGN
SGPNNWQGGPPQGSGGKNWNNNQNWGQNGPPPSWNQSNNPGWNGGKNGNWNQGNWPNGQG
WGGNGGGGSGSSGSNGGWNNNKPQT
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaagataatttcagtgaagatatatttgagtatattaaagttagtgaagat
gaagatgattcaaatgctgttgaaattccttgtgaattagacgggaccttattgctatct
acgctagtggcacaattccctggagcttgcggactcaaataccgccatcctgatagcaaa
actattcggggaatacgtcttagtgatggcaaattgcatccaccgagtgaacaaggttgg
gcaaaacttttatttatatgcgtttttccaaaggaaaataaacgcaaaatggaagacgta
tcaccggaaaattcagcggctaaaactaaacgcttagaaaagaaactaacttgttctgat
ttgatatgtcttggcttaccttggaaatcaactgaagaatcaattaaacaatattttgaa
aagttcggcgaagttgtaatggttcagttaaaacgagataaaaacggattgtttaaaggc
ttcggctttataaggtttgctacatatgcctcacaaatgcgagctcttgctcaaaggcat
aacatagacggtcgctgggttgatgttcgtattcctaattctaaagagggagtagtaccg
caaatgccttgtaaagtttttgtcggcagatgtacagaagatatgacagcagatgatttg
agagaatatttttcaaagtttggtgaagtaacagatgtctttgttccgcgaccgttcaga
gcattcgggttcgttactttcttagatccagaagtggcacaaagtttatgtggtgaagac
cacgttataaaaggtgcatcagtttctgtgtcaagtgctgcaccaaaaattaaaagtaaa
tctaatcctaattggaaagatgactcctatggaccaaacaattgggaaggaaatcggtca
ggtccatctggagggtcaaatggcagtggcagcaacaataacattgatactctcaatatg
cagaacttaggcataaatccaaatggtggtccaccagctaacttcaatttgccaataagt
cttgttgctgcagctttgaaccaagctggctggggtggatttttgggtggtccaggtaat
tcaggtccaaataattggcagggtggccctcctcaaggcagtggaggtaaaaattggaat
aataatcaaaattggggtcaaaatggacctcccccatcatggaatcaaagtaataatcca
ggctggaatggtggaaaaaatggcaattggaatcaaggcaactggccaaatggacaagga
tggggtggtaatggagggggaggttcagggagttcagggtctaatggtggatggaataac
aacaaaccccagacatga
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