Candidatus Nitrosopumilus sediminis: NSED_00300
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Entry
NSED_00300 CDS
T02303
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00541
Biosynthesis of various nucleotide sugars
nir01100
Metabolic pathways
nir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NSED_00300
Enzymes [BR:
nir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
NSED_00300
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
KR
NmrA
Shikimate_DH
Polysacc_syn_2C
Semialdhyde_dh
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AFS81872
UniProt:
K0B9Z9
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All DBs
Position
57980..58966
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AA seq
328 aa
AA seq
DB search
MNNKNILITGGTGSFGHQMIKELMPYKPKTVRIFSRDEDKQHSMKMELEKEPIFKKIEFV
IGDVRDYDRMYTVTKDIDIVFHAAALKQVPTVESHPYEAVKTNIFGAYNVVKASVVRKVK
NVIAVSTDKAVKPVNAMGMTKALQEKIILSDDLSKDGTKFCCVRYGNVLGSRGSVIPLWN
SKIEAKQPLPITHKEMTRFLLTLSDAIDLVFYSLKHGKGGEIFVKKAPAAKMTDLALAYA
ELKTGKKDYPLEFIGVRAGEKIDEVLVSHEEMRRAQERKDHFVINRENDFDITSLKKSLK
NIEYDSSNANHLSIKELKEIMKKLNWVL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacaaaaatatcttgataactggaggtacgggtagttttggacatcaaatgatt
aaagaattaatgccttacaaacctaaaactgttagaatttttagtcgagatgaagataaa
cagcattcaatgaaaatggaattagaaaaggaacctatctttaaaaaaatagaattcgtt
attggtgatgttcgtgattatgatagaatgtatactgttacaaaagatattgatatagtt
tttcatgctgctgctcttaaacaagtacctactgtggaatcacatccatatgaagctgta
aaaacaaatatttttggagcatataatgttgttaaagcctctgtagtaagaaaagtcaaa
aatgttattgcggttagtactgacaaagcagttaaaccagtaaatgctatgggaatgact
aaagccttacaagaaaaaattattctttctgatgatttatcaaaagatggaacaaaattt
tgttgtgtaagatatggaaatgttcttggaagtagaggaagcgtaatcccattatggaat
tcaaaaatagaagcaaaacaacctttgccaataactcataaagaaatgactcgattttta
cttacattatctgatgccatagatttagtattttattctcttaaacatggaaaaggtggg
gaaatttttgttaaaaaagctccagctgcaaaaatgactgatcttgcattagcatatgct
gaattgaaaacaggaaagaaagactatcctctagaatttattggtgtaagagctggagaa
aaaattgatgaagtacttgtttctcatgaagagatgagacgtgctcaagaaaggaaagat
cattttgttattaatcgagaaaatgattttgatataacatctttaaagaaatctctaaaa
aatattgaatatgattcaagcaatgcaaatcatttgagtataaaagaactaaaagaaatt
atgaaaaaactcaattgggttttgtaa
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