Candidatus Nitrosopumilus sediminis: NSED_01625
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Entry
NSED_01625 CDS
T02303
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00020
Citrate cycle (TCA cycle)
nir00270
Cysteine and methionine metabolism
nir00620
Pyruvate metabolism
nir00630
Glyoxylate and dicarboxylate metabolism
nir00680
Methane metabolism
nir00710
Carbon fixation by Calvin cycle
nir00720
Other carbon fixation pathways
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01120
Microbial metabolism in diverse environments
nir01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NSED_01625
00620 Pyruvate metabolism
NSED_01625
00630 Glyoxylate and dicarboxylate metabolism
NSED_01625
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
NSED_01625
00720 Other carbon fixation pathways
NSED_01625
00680 Methane metabolism
NSED_01625
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NSED_01625
Enzymes [BR:
nir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
NSED_01625
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GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
DUF1512_C
Motif
Other DBs
NCBI-ProteinID:
AFS82137
UniProt:
K0BAL7
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All DBs
Position
complement(276857..277771)
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AA seq
304 aa
AA seq
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MITIIGSGKVGGDAALFSALKRLDDQILLLDVAEGLPQGEAMDINHMLSEQGIDVEVKGS
NDFADMKGSNVVVVVAGSGRKPGMTRMDLLKINASIVKSVVENVKKYADDSMIIPVTNPL
DPMAYITYKVSGFDRSRVFGMGGMLDLSRFRQFIHEATGHSRDSIRALVIGEHGENMLPL
PRFSSVSGIPLSTFLPKEKLDELVTNTKQVAAKVIELKGATVHAPGNAISAIVESVVRDR
KQVIPVATYLDGEYGHSDVTIGVPAIIGKKGVEKIIELDLNDEERQVFDKAVASVKSAIS
GIEI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgattactattattggttcaggtaaagtaggcggagatgccgcattattttcagcatta
aagcgattagatgatcaaatattattactagatgttgctgaaggtctcccccaaggagaa
gccatggatatcaatcacatgttatcagagcaaggaattgatgtagaagtaaaaggatca
aacgattttgcagatatgaagggatcaaatgttgtcgttgttgtggcaggttccggaaga
aagccaggaatgaccagaatggatcttttgaaaattaatgcgtcaattgtaaagagcgta
gttgagaatgtaaaaaaatatgcagatgattcaatgataatcccagtaacaaatccactt
gatcctatggcttacattacttacaaggtttctggatttgatagaagtagagtctttgga
atgggaggaatgcttgatctatcaagatttagacaatttattcatgaagcaacaggtcat
tctcgtgattccatcagagcattagtaattggtgaacatggagaaaacatgttaccactg
ccaagattttcatccgtatcaggaattccattatcaacttttctacctaaagagaaactg
gatgaattagtaactaatacaaaacaagtagcagctaaagtaattgaattaaaaggcgct
acagttcatgcaccaggaaatgcaatttctgcaattgtagaatctgttgtaagagataga
aaacaagtcattccagttgcaacatatcttgatggagaatacggtcattcagatgtaaca
ataggagttccggcaataattggtaaaaaaggagttgagaaaattattgaattggatcta
aatgatgaagaaagacaagtatttgataaagcagttgcgagtgtaaaaagcgccatctca
ggtatcgaaatctaa
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