Candidatus Nitrosopumilus sediminis: NSED_02190
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Entry
NSED_02190 CDS
T02303
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00290
Valine, leucine and isoleucine biosynthesis
nir00660
C5-Branched dibasic acid metabolism
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01210
2-Oxocarboxylic acid metabolism
nir01230
Biosynthesis of amino acids
Module
nir_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
NSED_02190
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
NSED_02190
Enzymes [BR:
nir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
NSED_02190
4.2.1.35 (R)-2-methylmalate dehydratase
NSED_02190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Aconitase_2_N
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AFS82248
UniProt:
K0B7Y4
LinkDB
All DBs
Position
371885..372376
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AA seq
163 aa
AA seq
DB search
MKGNVIKYAQDNIDTDVIIPGQYLKVHDYAELATHAMEGLDPDFHSKVKEGDFILSGKNF
GCGSSREHAPIALSHSGIKAVLALSFARIFYRNAVDGAFLLPIEIEQDAYDGISDGDEIT
IDVSVNEIKNITKNQTYKMKPFSEIIGKIIAAGGLFKYKPDQD
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaacgtaataaaatacgctcaagataatattgacacagatgtcattattcca
ggccaatatctcaaagtacatgattatgcagaacttgcaactcatgcaatggagggatta
gatcctgattttcattctaaagtaaaagagggcgattttattttatctgggaaaaatttt
ggctgtggctcatcacgtgaacatgctcctattgcgttgtctcattctggaataaaggca
gtacttgcattatcttttgcaagaattttttaccgaaacgcagttgatggtgcgtttttg
ttacctattgaaattgaacaggatgcatatgatggaatttcagatggtgatgaaatcaca
attgacgtatctgtaaatgaaattaaaaatataacaaaaaatcaaacatacaaaatgaaa
cctttttcagaaattatcggaaagataattgctgcaggtgggctcttcaagtacaagcca
gaccaggattaa
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