Candidatus Nitrosopumilus sediminis: NSED_04555
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Entry
NSED_04555 CDS
T02303
Name
(GenBank) hydroxymethylglutaryl-CoA synthase
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00280
Valine, leucine and isoleucine degradation
nir00650
Butanoate metabolism
nir00900
Terpenoid backbone biosynthesis
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
Module
nir_M00849
C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NSED_04555
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NSED_04555
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NSED_04555
Enzymes [BR:
nir01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
NSED_04555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Motif
Other DBs
NCBI-ProteinID:
AFS82717
UniProt:
K0BC69
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All DBs
Position
complement(740673..742067)
Genome browser
AA seq
464 aa
AA seq
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MAAGIDDIAIYIPRLYIDAADFAKNRGLDPVKLQKGLGVSQMAIVDANQDPACLAANACL
RIMQKNKLSPEDIGRLYVSTESAFDESKAMNSYVIGMLEQVYGQGAFEHCGGVETKFACV
SGSYALYDNTNWIRAGEAEGKHALVVVSDIAKYDMGSSGEMTQGAGAVVMLLNDDPRLLA
FDPKVTSTSIKDEYDFYRPFGKETPIVHGQYSNLLYMIQVRKALEAYKKKVISSGLIKIE
PGETILDHMDYINMHLPYSNMGKKALAYLVRHEWRQLPRWKKILQEIGIEEPRPKDPRGT
IESVLGDEEFMAKDHEFTKLFTKTQAYQEVYESKLSSSLIASSMIGNLYTASLYLGFRSS
LEFEYQKGIDLEGKRVGFGSYGSGSSAMVFSGVIQPSYKEMVKDMNLEAEIGERKRLTWD
EYEELHENKLTPEESMVHSKKEFVLVHIDTEKESRGERRYIYNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggtatagacgatattgcaatatacattcccagattgtatatcgatgcagct
gattttgcaaaaaacagaggattagacccagtaaaattgcaaaagggtctaggagtttct
caaatggcaatcgtagatgcaaatcaagaccctgcatgtcttgcagcaaatgcatgtttg
cgaattatgcaaaaaaataaactttcaccagaagatatcggcaggttgtatgtttcaaca
gaatcagcatttgatgaatcaaaggcaatgaactcatatgttattggcatgttagaacaa
gtttacggtcagggagcatttgaacattgtgggggagtggaaactaaatttgcttgcgta
agtggttcttatgcactttatgataatacaaattggattagggcaggggaagcagaagga
aaacatgcacttgtggtagtttcagatattgcaaaatacgacatggggtctagtggagaa
atgactcaaggtgcaggcgcagtagtcatgttattgaatgatgacccaagattattagca
tttgatcctaaagtaacatccacatcaattaaagacgaatatgacttttacagacctttt
ggaaaagaaacacccattgttcatgggcaatattctaatttactatacatgattcaagtc
aggaaagcactggaagcatacaagaaaaaagtaatttcgtcaggattaatcaaaattgaa
cctggtgaaacaattctcgatcatatggattacatcaacatgcacttgccatacagcaac
atgggtaagaaagctttagcatatttagtcagacatgaatggagacagcttccacgttgg
aagaaaatattacaagaaatagggattgaagaacctagaccaaaagatccacgtggtaca
attgaatctgtgttaggagatgaagaatttatggcaaaagatcatgaatttacaaaattg
tttacaaagactcaggcataccaagaagtttatgaatccaaactatctagttcacttatt
gcatcaagtatgattggtaatttgtacacggcatcactttacttaggatttagaagcagt
ttggaatttgaatatcaaaaaggaattgatttggaaggaaaaagagtaggatttggatct
tatgggagtggtagtagtgcgatggtgttcagcggtgttatccaaccatcttacaaagaa
atggtaaaggatatgaatttagaagcagagataggtgaaagaaagcgattgacatgggac
gaatatgaagaattacacgaaaacaaactaaccccagaagaatcaatggttcattcaaag
aaggaatttgttttagtacatatagatactgaaaaagagtccagaggcgaaagacgttac
atttacaatgaataa
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