KEGG   Candidatus Nitrosotenuis sp. DW1: DSQ19_10220
Entry
DSQ19_10220       CDS       T07741                                 
Name
(GenBank) DNA lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
niu  Candidatus Nitrosotenuis sp. DW1
Pathway
niu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:niu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DSQ19_10220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:niu03400]
    DSQ19_10220
Enzymes [BR:niu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DSQ19_10220
DNA repair and recombination proteins [BR:niu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DSQ19_10220
 Prokaryotic type
     DSQ19_10220
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 Ogg-HhH AGOG DUF2400 RecR_HhH
Other DBs
NCBI-ProteinID: QLH09785
UniProt: A0A7D5M909
LinkDB
Position
1785640..1786293
AA seq 217 aa
MERILGGMMKTMNSVKPPRMTALRELHDAEDGNPFSILIGTILSARTKDENTAKVVKKLF
AEYKTPKDLAGAKIKDIEKIIRSIGFYHVKARRIVDVAKIIQSQYKGVVPDNLDQLIMLP
GVGRKTANCVLVYAFEKPAIPVDIHVHRISNRLGLVETKTPEETEFELMKKVPREYWLRV
NDTFVMYGQNICKPISPMCNVCKIKKLCKYYKTRNAS
NT seq 654 nt   +upstreamnt  +downstreamnt
atggagagaattcttggcggtatgatgaagactatgaattctgtaaaaccgccgcgaatg
acggcactaagagagctgcatgatgcggaagatggcaatccttttagtattcttattgga
acaattctttctgcaaggacaaaagacgaaaacacagcaaaggttgtaaaaaaattattt
gccgaatacaaaacaccaaaggatctggcaggtgcaaaaataaaagacattgagaaaatc
ataagatcaattgggttctaccatgtaaaggcaaggcgcatagttgatgttgcaaaaata
atccaatcgcagtacaaaggagttgttcctgataatttggaccagctcatcatgcttcca
ggagtcggacgaaaaacagcaaattgtgtgttggtttatgcctttgaaaagccagctatt
ccagtagacattcatgttcacagaatatcaaacaggcttggccttgttgaaacgaaaacg
cctgaagagaccgaatttgaactcatgaagaaagttccaagagaatactggctgagagta
aacgatacgtttgtcatgtatgggcagaacatatgcaagcccatatctccaatgtgcaat
gtttgtaagatcaaaaaactatgcaaatactacaaaactaggaacgcttcttaa

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