Niveibacterium microcysteis: JY500_08925
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Entry
JY500_08925 CDS
T07082
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
niv
Niveibacterium microcysteis
Pathway
niv01501
beta-Lactam resistance
niv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
niv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JY500_08925
01503 Cationic antimicrobial peptide (CAMP) resistance
JY500_08925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
niv03036
]
JY500_08925
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
niv02000
]
JY500_08925
01504 Antimicrobial resistance genes [BR:
niv01504
]
JY500_08925
Chromosome and associated proteins [BR:
niv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JY500_08925
Transporters [BR:
niv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JY500_08925
Antimicrobial resistance genes [BR:
niv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JY500_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_MFP_RND
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_YBHG
YknX_C
HH_EMRA
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_CzcB
ATP-synt_B
BSH_CusB
Biotin_lipoyl
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
QSI78709
UniProt:
A0ABX7MD45
LinkDB
All DBs
Position
1957311..1958525
Genome browser
AA seq
404 aa
AA seq
DB search
MHPTPILPPSARSAFALAVLSLVLVACGKQGGQQEHGGMPPADVAVTTVALRDVPVDFEY
VGQVAGSREIEVRARVTGIIEKRLYEEGTLLKAGQPMFLIDQAPFRARVASAEAALTQAQ
ARLKQAEREYNRIKPLAAEQAVSQKDADDAASAFELARAAVKSAEADLTTARIDLGYTEV
RAPLGGVAGRALKVEGGLAAAGGDSLLATLAQTDPAHVNYGVGEEEALRLRDEAANGKLV
LPKDGFAVKLKLSDGSMLDRVGRIDFHDYKADSNTGSFAARASVPNADGKLAPGQFVRVI
LSGATRPQAVVLPQRAVLDSPNGKYVYVVGQGKEGATIAQPRPVQVGEWVKLEGDLANAW
VIRDGLKPGDQVIVDGTARIFFPGAPIKVGGAAPAAQSAPAGKH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaccccgattcttcccccatcggcccgcagcgcgtttgcgctggcggtgctt
tcgctcgtgcttgttgcctgcggcaagcagggtggccagcaggaacatggcggcatgccg
cctgccgacgtagccgtcaccacggttgccttgcgcgatgtgccggtcgatttcgagtat
gtcggccaggtcgcgggttcgcgcgagatcgaggtacgtgcgcgcgtgaccggcatcatt
gaaaagcgcctgtatgaggaaggcaccctgctcaaggccgggcaaccgatgttcctgatc
gaccaggcgccgttccgcgcgcgcgtggcttctgccgaagcggcgctgacgcaggcgcag
gcgcgcctgaagcaggcggaacgcgagtacaaccggatcaagccgctggccgctgaacag
gccgtgagccagaaggatgcggatgacgccgcttcggccttcgagctcgcgcgggcggcg
gtgaaatctgccgaagcggatctgaccaccgcacgcatcgaccttggctataccgaagtc
cgcgcaccgctcggcggtgtcgccgggcgcgcgctgaaggtggagggcggtcttgctgct
gctggcggcgacagcctgctcgcgacgctggcgcagaccgatccggcgcatgtgaactac
ggcgtgggcgaggaagaagcactgcgcctgcgcgacgaagccgccaacggcaagctggtg
ctgccgaaggacggtttcgcggtgaagctgaagctctccgacggctcgatgctcgatcgt
gtgggtcgcatcgactttcatgactacaaggccgattcgaataccggcagctttgccgcg
cgtgcgagcgtgccgaacgctgatggcaagctggcgccgggacagttcgtgcgcgtgatt
ttgagtggcgcgacgcggccgcaggccgtggtactgccgcagcgcgcggtgctggattcg
cccaatggcaagtacgtttacgtggtgggccagggcaaggaaggcgcgacgatcgcgcag
ccgcgcccggtgcaggtgggcgagtgggtcaagctggagggtgacctggccaatgcctgg
gtgatccgcgacggcctcaagccgggtgatcaggtcatcgtcgatggcaccgcccgtatc
ttcttccccggcgcgccgatcaaggttggcggcgcagcgccggcagcccaatccgccccc
gctggcaagcactga
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