Candidatus Nitrosopumilus sp. SW: Nisw_07860
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Entry
Nisw_07860 CDS
T06175
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Nisw_07860
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
niw01007
]
Nisw_07860
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niw03016
]
Nisw_07860
Enzymes [BR:
niw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Nisw_07860
Amino acid related enzymes [BR:
niw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Nisw_07860
Transfer RNA biogenesis [BR:
niw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Nisw_07860
Prokaryotic type
Other AARSs
Nisw_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
DUF5915
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
QDI89444
LinkDB
All DBs
Position
complement(1308647..1311844)
Genome browser
AA seq
1065 aa
AA seq
DB search
MELSTKFDAKAIESEIKEYVKSIDLEKQIFASDKPEKIRFIEGPPTMNGIPHAGHLRGRV
IKDLWYRYNTLQGKKIEFNGGWDTQGLPVELQVEKELGVTGGKTEAIKQFGVERIVSECK
KVVEKYNKTWVKVDELLGMSFNHEKAYWTFRDEFIEREWQVLKKAYENGILEEDFTVIAY
CPSCQTSLSHAEVNQGYEEVKDPSLYYKVKLVDEDAFLIVWTTMPFTLVTDAMVGLQPEE
DYVYVKVENETWVVGKTRLEEFMTEVKIEEYEIEKTVKGSEFEGKKYIHPLLNLIPELNE
CSKADNFHVAVSESFVDASTGSGLVHLSPANGEEDIKIANKRKVKVFSPIDDEVKFTAQA
GKYQGMFVRDADRTIVEDLKECNALVKIGKIKHKYPLCWRSHHPIVWLARKGWFYKLDRL
DNKAIDAAESVEYYFEQPKNRFLGIIKERHPWCISRERIWGCPLPVWTCEECNERNWFFT
RKEIVESANNLPDGPDFELHRPWIDNITIKCKKCGSTKTKREEYVLDTWHNSGSAPYSSL
TDEEYSNEIPAPFFTEGIDQTRGWAYTLLIENVILNNGPIPPYKSFLFQGHVLDEKGGKM
SKSKGNVLEGIELLEKYPADLIRFYFMWKASPIEPLSFSTEELMSRPYQVINTLFNLHLY
FKQNSQYDNFDKSNTVEWAKQKNLLTSPDIWLLSKLQKLILKITDRNNSCKFHEGAKAID
DFIINNLSQIYIPITRGELWDEDEEKKERRLAIYAVLAEVLKTLDILIHPFCPFTSEHLY
QTVFDGKQSILLDKWPKSQESLVNEEIEESFDIMKDVVSISSAARMKGKLKRRWPLNEAK
ICVKEGLKAKLESLSELLQSQLNVEKFNIIETEKESGLEQILELKQLGLPVKPIIELERK
RIGPKAKQHMGKLVAKFSETNPEEIISALQKDSKFDFDIDGEVISLDNEDFVIDFDADEN
FAVSKRDSYVVFISTSRNKEMMAKGLIKDVARRLQTLRKERGYNPTDVLGVASILDLDEE
SLEMIKEKADDLAFLVRVKQVNFTESCKEYKDDDIDGQKIRISVE
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggaactttccacgaaatttgatgcaaaagcaattgagtcagaaattaaagaatatgtg
aaatcaattgatttagaaaaacagattttcgcatcagacaaacctgaaaaaataagattc
attgaaggacctccaacaatgaacggtattcctcatgcaggacatcttagaggtagagtc
atcaaagatttgtggtatagatacaatacacttcaagggaaaaaaattgagtttaatgga
ggatgggatactcaaggactccctgtggaattacaggtagaaaaagaattaggagtaaca
ggaggaaagacagaagccataaaacaatttggggtagaacgaattgtttctgaatgcaaa
aaagttgttgagaaatacaacaaaacatgggtcaaagtagacgaattacttggaatgtca
tttaatcatgaaaaagcatattggacttttcgagatgaatttattgaaagagaatggcaa
gtactaaaaaaagcatatgaaaatgggattttagaagaagactttacagttattgcatat
tgtcctagctgccaaacatctcttagtcatgcagaagttaatcagggatatgaggaagta
aaagacccatcattatattataaagtaaaactggtagatgaagatgcatttttgattgta
tggactacaatgccatttacactagtaactgatgcaatggtagggttacaacctgaagaa
gattatgtttatgttaaagtagaaaatgaaacttgggttgttggaaaaacaagactagaa
gaattcatgacagaggtgaaaattgaagagtatgaaattgaaaaaacagtcaagggttca
gaatttgaagggaaaaaatacattcatccattattgaatttaattccagaattaaacgaa
tgttctaaagcagataattttcatgttgcagtatcagaatcattcgtagatgcaagtaca
ggtagtggtcttgtacacctatctccagcaaatggtgaggaagatatcaaaattgccaat
aagagaaaagtcaaagttttcagtcccatcgatgacgaagtaaaattcacagcacaggca
ggaaaatatcaaggaatgtttgtcagagatgcagacagaacaattgtagaagatctaaaa
gaatgcaatgctctagtaaaaattggaaaaatcaaacacaagtatcctctttgttggaga
tcacaccatccaatcgtatggcttgcaagaaaaggttggttttacaaattagatagatta
gataacaaagcaattgatgcagctgaaagtgtagaatattattttgaacaaccaaaaaac
agattcctaggaatcatcaaagaaagacacccttggtgtatttcaagggagaggatttgg
ggatgtccattgccagtatggacatgtgaagaatgtaatgaaagaaactggtttttcaca
agaaaagaaattgttgaatctgcaaacaatcttcctgatggcccagactttgaactacac
agaccatggattgacaatattacaataaaatgcaaaaagtgcggaagtacaaaaacaaag
agagaagagtatgtcttagatacctggcacaatagtggttctgcaccatattcatcatta
actgatgaagaatattcaaatgaaattcctgcaccattttttactgagggaattgatcaa
actagaggatgggcatatacgttacttattgaaaatgtaatcttaaacaacggaccgatt
ccaccatacaagtcatttttgttccaaggacatgtgctggatgaaaaaggaggcaagatg
agtaagagtaaaggtaatgttttggaaggaatagagttactagaaaaatatcctgcagat
ttgattagattttactttatgtggaaagcaagcccaattgagccactaagtttcagtaca
gaagagttgatgtcaagaccatatcaagtaatcaacacgctattcaatttgcatttgtat
tttaaacaaaatagtcaatatgataattttgataaatcaaacacagtagaatgggcaaaa
caaaagaatttgttaacatcaccagatatttggcttttatcaaaacttcaaaaattgatt
ctaaaaatcacagaccgaaataattcatgcaagtttcatgagggtgcaaaagcaattgat
gactttatcattaacaatctaagtcaaatttacatcccaattacaagaggggaattatgg
gacgaggatgaggagaaaaaagaaaggcgactagcaatttatgcagtgttagccgaagtt
ctaaaaacactagatattttgattcatccattttgtccatttactagtgagcatctgtat
caaacagtttttgatggaaaacaaagcatactacttgacaaatggccaaaatcacaagag
tcactagtaaatgaagagattgaagagtcatttgacataatgaaagatgtggtatctatt
tcatcagctgcaagaatgaaaggtaagctaaaaagaagatggccattaaatgaagcaaag
atttgtgtaaaggaaggtctaaaagcaaagttagaatcattgtcagaattactccaatct
caactaaatgtagagaaatttaacataattgaaacagagaaagaatcaggattagaacaa
attttagaattaaagcaattaggattgcctgtaaaaccaattattgaattagaaagaaag
agaataggaccaaaagcaaaacaacacatgggaaaactagttgcaaaattttctgaaaca
aatcctgaagaaataatttcagcattacaaaaagattcaaaatttgattttgatattgat
ggtgaagttatttcattagataacgaagactttgtaatagattttgatgcagatgaaaat
tttgcagtatcaaaaagagatagttatgtagtgtttatctcaacatcacgaaacaaagag
atgatggcaaaaggattgatcaaagatgttgcaagaagattacaaactttaagaaaagag
agaggatacaatccaacagatgttttaggtgtagcatcaatccttgatttagatgaagag
tcacttgaaatgattaaagaaaaagcagatgatttggctttcttggtgagagtaaaacaa
gtgaactttactgaatcatgtaaagaatacaaagatgatgatatagatggacaaaaaatt
agaatttcagtagaataa
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