Nitrospira japonica: NSJP_2517
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Entry
NSJP_2517 CDS
T05001
Name
(GenBank) Efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nja
Nitrospira japonica
Pathway
nja01501
beta-Lactam resistance
nja01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NSJP_2517
01503 Cationic antimicrobial peptide (CAMP) resistance
NSJP_2517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nja03036
]
NSJP_2517
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nja02000
]
NSJP_2517
01504 Antimicrobial resistance genes [BR:
nja01504
]
NSJP_2517
Chromosome and associated proteins [BR:
nja03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NSJP_2517
Transporters [BR:
nja02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NSJP_2517
Antimicrobial resistance genes [BR:
nja01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NSJP_2517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
HH_MFP_RND
Beta-barrel_RND
HH_EMRA
YknX_C
HH_YBHG
CzcB_C
BSH_CusB
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
SLM48689
UniProt:
A0A1W1I738
LinkDB
All DBs
Position
I:2381779..2382984
Genome browser
AA seq
401 aa
AA seq
DB search
MARSRIPGFSPSGAVFLTIVGLAALGASGCERKDAVSALAPDVLVTEVVRRDVPIYAEGV
GTTAGTIDAQIRAKVQGYLLTRNYVEGSYVKAGDLLFKIDARPYQASFDQLRGELARAEA
AYKKTQMDVARDTPLAKQGAVSQKELDDSIQANEANKANVFSARANLEKGKLNLDWTSIA
SPVDGVAGVASAQIGDLIMENTVLTTVSQVDPIKVLFPISEKMYLRFAERIQKAVANPTG
DQRSSAPLELILADGTVYAHKGKAALPDRQVDVKTGTITIVSYFPNPGNVLRPGQYAKVR
AVVETVRDALLVPQRAVQELQGIYQVAVVDADNKIAVRSVKPGARIGSQWVITSGLNQGE
RVVVEGLQKVRSGLVVSPKPVPPEPASTDPDRQPAPPAAGT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ttggctcgttcacgcatcccaggattctctccctccggtgccgtttttctgacgatcgtc
ggtcttgccgcgctgggggcttccggctgcgagcgcaaagacgcggtctcggcgctcgct
cccgacgtgctggtgaccgaggtggtccgccgtgacgttcccatttacgccgagggagtc
gggacgacggccggcacgatcgacgcccagatcagggccaaggtccaaggctatctgttg
acgcgcaactacgtcgaaggctcctacgtcaaagccggggatttgctgttcaagatcgac
gcccggccctaccaggcatccttcgatcagttgaggggcgagctggccagggcggaagct
gcctacaagaagacgcagatggacgtggcccgggacacgccgcttgccaagcagggagcg
gtcagtcagaaggaactggacgattccattcaagccaacgaggccaacaaggccaatgtg
ttttccgccagagccaatctcgaaaagggcaagttgaacctggattggacgagcatcgcc
tcgccggtggacggtgtagccggcgtcgcgagcgctcaaatcggcgatctgatcatggag
aacaccgtcctgaccacggtatcccaggtggatccgatcaaggtgctcttccccatcagc
gaaaaaatgtatctccgcttcgcggaacgcattcagaaagcagtcgccaatccgaccgga
gatcagcggtcttccgcgccgttggaactgatcttggcggacgggaccgtctacgcccac
aagggcaaggcggcgcttcccgatcggcaagtcgacgtcaagaccggaaccatcacgatc
gtgagctatttcccgaatcccggcaacgtgcttcgtcccggtcagtatgcgaaggtccgt
gcggtcgtggaaacggtccgggatgcgttgctggtcccgcagcgcgccgttcaggaactc
cagggcatctatcaagtggcggtcgtcgacgcggacaacaagatcgccgtccggagcgtc
aagccgggagcgaggatcgggagccagtgggtgattacgtccggcctgaaccagggagag
cgggtggtcgtcgagggacttcagaaagtccgcagcggcctcgtggtctcgcccaaaccc
gtcccgcctgaaccggcgtccaccgatccggaccggcagcccgcgccgccggccgccggt
acctaa
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