Nitrospira japonica: NSJP_3422
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Entry
NSJP_3422 CDS
T05001
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nja
Nitrospira japonica
Pathway
nja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NSJP_3422 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nja03400
]
NSJP_3422 (nth)
Enzymes [BR:
nja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NSJP_3422 (nth)
DNA repair and recombination proteins [BR:
nja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NSJP_3422 (nth)
Prokaryotic type
NSJP_3422 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
SLM49589
UniProt:
A0A1W1I9P5
LinkDB
All DBs
Position
I:complement(3278247..3278909)
Genome browser
AA seq
220 aa
AA seq
DB search
MIPKQLQQKARQERLGKIAENLIRSMPAAEMELDHRTPWELLIATILSAQCTDERVNRVT
PALFRRYPTPADLGQASQRDVEEVIRSTGFFKSKAKNIIACGRAVEEKFHGKVPETMEEL
VGLPGVGRKTANVLLGNAFGKPAIVVDTHVKRVANRLGFTTSDDPTRIEQDLQRLLPPAR
WTAVSQRLLLHGRYVCTARRPQCERCPIYAHCTWKQKGPA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgatccccaagcaactccagcagaaggcacgtcaggagcgtctcggcaagatcgctgaa
aatttgatccgttccatgccggccgccgagatggaactcgaccatcgaactccatgggaa
ctcctcattgccaccatcctgtccgcacaatgcacggatgaacgggtcaaccgcgttacc
cccgcgctgttccggcggtatcccacaccggcggatttgggacaggcttcgcagcgagac
gtggaagaagtcatccgttcgacgggattcttcaagagcaaggcgaagaacatcatcgct
tgtggtcgcgccgtggaggagaagtttcacggaaaggttccggagaccatggaagaattg
gtcggtctgccgggagttggaagaaagaccgccaacgtcctattaggcaatgccttcggc
aagccggcgatcgtcgtcgatacccatgtcaaacgagtcgccaaccgccttgggtttacg
acctcggacgatccgacccgcatcgaacaggatcttcaacggctgcttccgcccgcgcgc
tggacggccgtctcgcagcgcttgctgctgcacggacggtatgtctgcactgccaggcgc
ccgcaatgcgaacgttgtccgatttacgcgcactgtacgtggaaacagaaagggcccgca
tga
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