Candidatus Njordibacter sp. Uisw_002: ABXT42_05405
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Entry
ABXT42_05405 CDS
T11338
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
njo Candidatus Njordibacter sp. Uisw_002
Pathway
njo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
njo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABXT42_05405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
njo03400
]
ABXT42_05405 (nth)
Enzymes [BR:
njo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABXT42_05405 (nth)
DNA repair and recombination proteins [BR:
njo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABXT42_05405 (nth)
Prokaryotic type
ABXT42_05405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XOK00394
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All DBs
Position
complement(1142984..1143619)
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AA seq
211 aa
AA seq
DB search
MNNDKREAIFARLKAQNPHPETELNFNNHYELLVAVALSAQSTDVSVNKATKKLFEVANT
PQAMLDLGLEGLKNHIKTIGLYNSKANNVIQAAQLLVSNHNGLVPDSREALEALPGVGRK
TANVVLNTAFRQIAMAVDTHIFRWSNRTRVAPGKNVVEVEKKLLRFVPKQYLLDAHHWMI
LHGRYVCVARKPRCGACTIEDLCEFKQKTSD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgacaagcgtgaagcgatttttgccagactaaaggcgcaaaacccccaccct
gaaactgaactaaactttaacaatcattatgagctgttagtggctgtagcactttctgct
caatccaccgatgtaagcgtaaacaaagccactaaaaaactgtttgaagtagcaaataca
ccccaagcgatgcttgatcttggcctagaagggctaaaaaaccacattaaaaccatcggc
ctttataacagtaaagccaataatgtcatccaggccgctcagcttttggtttccaatcac
aatggcctagtacccgattcaagagaagcactggaagctttgcctggagtgggccgaaaa
acagccaatgtcgttcttaacaccgcttttaggcaaattgctatggccgtggatacacat
atttttcgttggtctaaccgcactcgtgtagccccgggcaaaaatgtggtggaggttgag
aagaaactgttacgctttgtgcccaagcaatacttgctagatgcccatcactggatgata
ctgcacgggcgttatgtttgtgtagcaagaaaaccacgctgcggtgcttgtactatagaa
gacctttgtgagtttaaacaaaagacttccgattaa
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