KEGG   Candidatus Nitrosopumilus koreensis: NKOR_00050
Entry
NKOR_00050        CDS       T02304                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
nkr  Candidatus Nitrosopumilus koreensis
Pathway
nkr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nkr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NKOR_00050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nkr03400]
    NKOR_00050
Enzymes [BR:nkr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     NKOR_00050
DNA repair and recombination proteins [BR:nkr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NKOR_00050
 Prokaryotic type
     NKOR_00050
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 AGOG RecR_HhH DUF2400
Other DBs
NCBI-ProteinID: AFS79936
UniProt: K0B641
LinkDB
Position
7193..7840
AA seq 215 aa
MEKILAKMMDTMNSVKTPRITALRDLHDAETGPFSILIGTILSARTKDESTTKVVKILFS
KYKNPKQLANAKLKDVEKIIKPIGFYHVKSKRIIEVAKIIDSKYKGKVPEDLETLVELPG
VGRKTANCVLVYAFEKPAIPVDIHVHRISNRIGLVDTKNPEETEQELMKKIDKKFWIDIN
DTFVMYGQNICKPISPMCDVCKIKRNCKFYKSKIT
NT seq 648 nt   +upstreamnt  +downstreamnt
atggaaaaaattctagctaaaatgatggatacgatgaactctgtaaagactccacgaata
actgcactaagagatcttcatgatgcagagacaggaccatttagtattttgattggaacc
attctttctgcaagaacaaaagatgaaagtacaactaaagtggtcaaaatattattttca
aaatataaaaatccaaaacaacttgcaaacgctaagctaaaagatgttgaaaaaataata
aaaccaattggtttctatcatgtaaaatctaaaagaatcattgaagttgcaaaaataatt
gattcgaaatacaaaggcaaagttcctgaagatctagaaacactagtagagttgccagga
gtgggaagaaagactgcaaactgtgtcttagtttatgcatttgaaaaaccagcaatacca
gttgacattcatgttcatagaatttcaaacagaataggcttagttgatacaaaaaatcct
gaagaaacagaacaagaattgatgaaaaaaattgataaaaaattctggattgacatcaat
gatacttttgtaatgtatggccaaaacatttgcaaaccaatatccccaatgtgtgatgtg
tgcaaaataaaaagaaactgcaagttttacaaatctaaaataacatag

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