Nitrosospira lacus: EBAPG3_000845
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Entry
EBAPG3_000845 CDS
T04907
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00300
Lysine biosynthesis
nlc00550
Peptidoglycan biosynthesis
nlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EBAPG3_000845
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EBAPG3_000845
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nlc01011
]
EBAPG3_000845
Enzymes [BR:
nlc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EBAPG3_000845
Peptidoglycan biosynthesis and degradation proteins [BR:
nlc01011
]
Precursor biosynthesis
Amino acid ligase
EBAPG3_000845
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ARO86440
UniProt:
A0A1W6SKV7
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Position
complement(189393..190982)
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AA seq
529 aa
AA seq
DB search
MNPESGVGDSKFTARSKAHFDFRALDHLGVRIGSLVTDSRMVKTGDTFLAYAGEQLDARR
YIPQAIAAGANAVLWERRGFAWDPEWQVPNLPIAGLRAQAGAIADHVYGHPSQKLWLIGI
TGTNGKTSCSHWIAQAMTALGKKTAIIGTLGAGFPGELESTANTTPDAVLLHREMADYLL
RGAQCVAMEVSSHGIVQGRISGSTFAVAVFTNLSRDHLDYHGSMEAYAAAKARLFHWPAL
KYAVLNLDDAYGVELSQQLSDLETRVIGYGFTEPALQPRSSEKFRVVRGRNLKLSPQGLE
FDIEFETGFETEYSRFATNVVGSFNASNLLGVLATLLASGIRLADAVQVLRQVRPVAGRM
EQIGGDDQPLIVVDYAHTPDALEKVLVALREILHAGSGASEKPGTALPKLICVFGCGGER
DRGKRPLMGAVATRLADEVIITSDNPRKEDPGVIIGQIAAGAGASYRIEEDRRSAIYRAI
LSAQKNDVVLIAGKGHETYQEVDGKKFPFSDAEVARQALRDLIRATMQT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaatccggagttggagattcgaaattcacggccagatcaaaggcgcatttt
gatttccgcgctcttgatcatctgggtgtcagaatcggcagcctggttacggatagccgt
atggtgaagacaggagatacttttctggcatatgccggagaacaactggatgcacgcagg
tacatccctcaagcgatagcggcgggggcaaacgcggtactgtgggaacgccgtggtttc
gcatgggatcccgagtggcaagtgcccaatttaccgatagccggattgcgagcccaggcg
ggcgccattgccgatcatgtttatggtcacccgtcgcaaaaactctggcttataggcatt
accggaacgaatggcaagacctcctgcagtcattggattgcccaggccatgaccgcgctg
ggcaaaaagacggcaatcatcggcacgttgggagccggttttcccggggaactcgaatcg
accgccaacaccacgccagatgcggttctgttgcaccgggagatggcggactatttgttg
cgcggcgcgcagtgcgtggcaatggaagtgtcgtcgcatgggatagtgcaagggcgtatc
agcggatcgacattcgcggtcgcggtattcaccaatctctcgcgtgatcatctcgattat
cacggcagcatggaagcatatgccgccgcaaaggcacgattgttccattggcctgcactc
aaatatgccgtactcaaccttgatgatgcgtacggtgtcgaattgtcgcaacagctttca
gacttggagaccagggtgatcgggtatggatttaccgaaccggcgcttcagcctcgaagt
tcggaaaaattcagggtggtacggggccggaatctcaaactaagcccgcaagggctggag
tttgatatcgagtttgaaacggggtttgaaaccgagtattcgagatttgcaacgaacgtg
gtggggagctttaacgcttcaaatttgctgggagtgctggctaccttgctggccagcggc
atcaggctcgccgacgctgtgcaggtcttgcggcaagtacggccggtggcgggcagaatg
gagcagatagggggggatgatcagccactgatagtggtggattatgctcatacgccggat
gccctggaaaaagtgctggtggcattgcgcgaaattctccatgccggttcaggtgcaagt
gaaaaaccgggaaccgcgctccctaaattgatctgtgtatttggctgcggaggcgagcgt
gaccgcggcaagcgccctttaatgggcgctgtggcgactcgcctcgccgatgaagtcatc
atcaccagcgacaatccgcggaaagaagatcctggtgtcattatcggccagatcgcggcg
ggtgcgggtgccagttaccgcatcgaagaagaccggaggtcggctatctaccgggcgatt
ctgagcgcgcaaaaaaatgatgtcgtgttaatcgcgggaaagggacatgaaacgtatcag
gaagtggacggcaaaaaattcccgttcagcgatgccgaggtcgcaagacaggcgctgcgg
gacttaatcagagcaacgatgcaaacatga
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