KEGG   Nitrosospira lacus: EBAPG3_002435
Entry
EBAPG3_002435     CDS       T04907                                 
Name
(GenBank) conjugal transfer protein TraR
  KO
K06204  RNA polymerase-binding transcription factor
Organism
nlc  Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:nlc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    EBAPG3_002435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nlc03000]
    EBAPG3_002435
   03021 Transcription machinery [BR:nlc03021]
    EBAPG3_002435
   03009 Ribosome biogenesis [BR:nlc03009]
    EBAPG3_002435
Transcription factors [BR:nlc03000]
 Prokaryotic type
  Other transcription factors
   Others
    EBAPG3_002435
Transcription machinery [BR:nlc03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     EBAPG3_002435
Ribosome biogenesis [BR:nlc03009]
 Prokaryotic type
  rRNA transcription factors
   EBAPG3_002435
SSDB
Motif
Pfam: zf-dskA_traR SHLD2_C WHD_MCM3_C
Other DBs
NCBI-ProteinID: ARO86719
UniProt: A0A1W6SLN8
LinkDB
Position
541149..541544
AA seq 131 aa
MAKLTEDQLAQLKTSLQQRYLDLREEVRGELESSGEQRYIELAGSVRDAGDGSVADLLLD
INTAMVDRQVHEMREVETSLKRLAELNFGDCIDCGSEIGFDRLMAYPTALRCVRCQDVYE
KTYSHEGTPTL
NT seq 396 nt   +upstreamnt  +downstreamnt
atggcaaaattgaccgaagaccagttggcgcaactgaaaacatccctgcaacaacgttat
ctggatttgcgggaagaagtccggggtgaactggaaagttcaggcgaacagcgttatatc
gagctggcgggtagtgtgcgcgatgccggcgacggttcggtggcggatttgctgctggat
atcaataccgccatggtggaccggcaggtgcatgaaatgcgtgaggtggagacttcctta
aaacgtttggcggagctgaatttcggtgattgtatcgattgcggtagtgaaatcggtttt
gaccggctgatggcttatcccactgcattacgatgcgtgcgctgccaggacgtgtatgag
aaaacctattcccacgagggaactccaaccctttag

DBGET integrated database retrieval system