Nitrosospira lacus: EBAPG3_005600
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Entry
EBAPG3_005600 CDS
T04907
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nlc
Nitrosospira lacus
Pathway
nlc01501
beta-Lactam resistance
nlc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EBAPG3_005600
01503 Cationic antimicrobial peptide (CAMP) resistance
EBAPG3_005600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlc03036
]
EBAPG3_005600
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlc02000
]
EBAPG3_005600
01504 Antimicrobial resistance genes [BR:
nlc01504
]
EBAPG3_005600
Chromosome and associated proteins [BR:
nlc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EBAPG3_005600
Transporters [BR:
nlc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EBAPG3_005600
Antimicrobial resistance genes [BR:
nlc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EBAPG3_005600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
HH_MFP_RND
HH_EMRA
Beta-barrel_RND
YknX_C
BSH_CzcB
BSH_CusB
HH_AAEA_pHBA
HH_YBHG
Biotin_lipoyl
DUF2529
Motif
Other DBs
NCBI-ProteinID:
ARO87285
UniProt:
A0A1W6SNB1
LinkDB
All DBs
Position
complement(1272558..1273796)
Genome browser
AA seq
412 aa
AA seq
DB search
MNLTIQWPMMLAPKDGAAIIRMSTGLLLTLLAGCSEKAPAPPPPIPQVEVITVATQTVPD
EPEFIGQTEAFRPVEIRSQVTGIIKKVFFTEGRNVKKDDRLYLIDPVPFRAIYLSGKARV
AQAQAELVQAEQDLARVKPLLEEQAVSRKNVDDAVAAVLGTRAALEAAQSDLVKAKFDLD
NTLITAPVNGRIGRSHFYEGRLVSAQTNLLTTIDQLDPMYVNVSVPESYLLRRRRELAEH
KVERPDIFQLRGVMTFSDGSVYPEEGILDFADVTLRSETGMLQARFMFSNPEGGYSPGQS
YFYPGQFVKIRIKGYIRTDAMLIPQRAVQQGPKGSFVYVIDAEDKAELRPIHASMWRGNE
WLIEDGLHTGERVVVEGFHRVRPGIQVSTIPYRNKKASSSERPEEQDAQKMP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgacaatacaatggccgatgatgctggcccccaaagacggggctgccattatt
cgcatgagtaccgggctgctcctgacgctccttgccggctgttcggagaaagcgcccgct
ccccctccgcccatccctcaggtggaagtcattactgtagccactcaaacggtcccggat
gaaccggagtttatcgggcagacagaagcctttcgtcccgtggagattcgatcgcaggta
accgggattatcaagaaagtcttttttaccgaaggccggaacgtcaaaaaggatgatcgg
ttgtatctcatcgatcctgtgcccttcagagccatctatctcagcggcaaagccagagtg
gcccaggctcaggctgagcttgtccaggctgagcaggacctggctcgcgtaaaaccgctt
cttgaggaacaggccgtaagccgaaaaaatgtcgatgatgccgtagcggcagtactggga
accagggccgcgctggaggccgcgcaaagcgatctggtcaaggcgaaattcgatctcgat
aacacgctcattaccgcacccgtaaacggccgcatcggacgcagccatttctacgaaggg
cggttggtctctgcccagaccaaccttttgaccaccatcgatcaactggatcccatgtat
gtcaatgtgagcgttccggaaagctatctcctccggcgacgccgcgaacttgcggaacat
aaagtcgagcggccggatatttttcaattacgtggtgtgatgaccttttctgacggaagt
gtatatccagaagaagggatactggattttgccgatgttaccttacgctccgagacagga
atgctgcaggcgcgatttatgttttccaatccggaagggggatattctcccgggcagtcg
tacttttatcctgggcagttcgtcaagattcgtatcaagggctatatacggaccgatgcc
atgctcatcccgcagcgggccgttcagcagggacccaagggatcgtttgtttatgtaatc
gatgcggaagacaaagcggaacttcgcccgattcatgccagcatgtggcgtgggaacgag
tggttgatcgaagatggtctccataccggagaacgggtggttgtggaaggttttcatcgc
gtgcggccaggcattcaagtaagcaccattccataccggaataagaaggcctcgtcgagt
gagcgtccggaggaacaagacgcgcaaaagatgccatga
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