Nomascus leucogenys (northern white-cheeked gibbon): 100589080
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Entry
100589080 CDS
T03265
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04360
Axon guidance
nle05017
Spinocerebellar ataxia
nle05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100589080 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100589080 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
100589080 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nle04040
]
100589080 (TRPC3)
Ion channels [BR:
nle04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100589080 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_3
MFS_4
Motif
Other DBs
NCBI-GeneID:
100589080
NCBI-ProteinID:
XP_003271391
Ensembl:
ENSNLEG00000009366
UniProt:
G1RDX0
LinkDB
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Position
7b:34154010..34231197
Genome browser
AA seq
921 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEDEGEDEGAEPQRRRRGWRGVNGGLEPRSAPSQREPHG
YCPPPFSHGPDLSMEGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAA
EYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALL
LAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILA
AHCQKYEVVHMLLMKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYL
SLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAIL
NGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIA
IKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDR
FEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQ
LWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARD
KWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMV
FFAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIG
YVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPF
SLVPSPKSFVYFIMRIVNFPKCRRRRLQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFNS
ILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATE
ELAILIHKLSEKLNPSMLRCE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggaacaagcaagggtgaccttccccgcgccggag
gaggaggaagacgagggcgaggacgagggcgcggagccgcagcgccgccgccggggctgg
aggggcgtcaacggggggctggagccgcgctcggcgccctcgcagcgggagccgcacggc
tactgcccgccgcccttctcccacgggccggacctgtccatggagggaagcccatccctg
agacgcatgacggtgatgcgggagaagggccggcgccaggctgtcaggggcccggccttc
atgttcaatgaccgcggcaccagcctcaccgccgaggaggagcgcttcctcgacgccgcc
gagtatggcaacatcccagtggtgcgcaagatgctggaggagtccaagacgctgaacgtc
aactgcgtggactacatgggccagaacgccctgcagctggctgtgggcaacgagcacctg
gaggtgaccgagctgctgctcaagaaggagaacctggcgcgtattggcgacgccctgctg
ctcgccatcagcaagggctacgtgcgcatcgtagaggccatcctcaaccaccctggcttc
gcggccagcaagcgcctcactctgagcccctgcgagcaggagctgcaggacgacgacttc
tacgcttacgacgaggacggcacgcgcttctcgccggacatcacccccatcatcctggcg
gcacactgccagaaatacgaagtggtgcacatgctgctgatgaagggtgccaggatcgag
cggccccacgactatttctgcaagtgcggggactgcacggagaagcagaggcacgactcc
ttcagccactcacgctcgaggatcaatgcctacaaggggctggccagcccggcatacctc
tcattgtccagtgaggacccggtgcttacggccctagagctcagcaacgagctggccaag
ctggccaacatagagaaggagttcaagaatgactatcggaagctctccatgcaatgcaaa
gactttgtagtgggtgtgctggatctctgccgagactcagaagaggtagaagccattcta
aatggagatctggaatcagcagagcctctggaggtacacaggcacaaagcttcattaagt
cgtgtcaaacttgccattaagtatgaagtcaaaaagtttgtggctcatcccaactgccag
cagcagctcttgacgatctggtatgagaacctctcaggcctaagggagcagaccatagcg
atcaagtgtctcgttgtgctggtcgtggccctgggccttccattcctggccattggctac
tggatcgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagtttgta
gcacacgcagcttctttcatcatcttcctgggtctgcttgtgttcaatgcctcagacagg
ttcgaaggcatcaccacactgcccaatatcacagttattgactatcccaaacagatcttc
agggtgaaaaccacccagtttacatggactgaaatgctaattatggtctgggttcttgga
atgatgtggtctgagtgtaaagagctctggctggaaggacctagggaatacattttgcag
ttgtggaatgtgctcgactttgggatgctctccatcttcattgctgctttcacagccaga
ttcctagctttccttcaggcaacaaaggcacaacagtatgtggacagttacgtccaagag
agtgacctcagtgaagtgacactcccaccagagatacagtatttcacttatgctagagat
aaatggctcccttctgaccctcagattatatctgaaggcctttatgccatagctgttgtg
ctcagcttctctcggattgcgtacatcctccctgcaaatgagagctttggccccctgcag
atctctcttggaaggactgtaaaggacatattcaagttcatggtcctcttcattatggtg
ttttttgcctttatgattggcatgttcatactttattcttactaccttggggctaaagta
aatgctgcttttaccactgtagaagaaagtttcaagactttattttggtcaatatttggg
ttgtctgaagtgacttccgttgtgctcaaatatgatcacaaattcatagaaaatattgga
tacgttctttatggaatatacaatgtaactatggtggttgttttactcaacatgctaatt
gctatgattaatagctcatatcaagaaattgaggatgacagtgatgtagaatggaagttt
gctcgttcaaaactttggttatcctattttgatgatggaaaaacattacctccacctttc
agtctagttcctagtccaaaatcgtttgtttatttcatcatgcgaatcgttaactttccc
aaatgcagaaggagaaggcttcagaaggatatagaaatgggaatgggtaactcaaagtcc
aggttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagc
attctcaatcagccaacacgttatcagcagataatgaaaagacttataaagcggtatgtt
ttgaaagcacaagtagacaaagaaaatgatgaagttaatgaaggtgaattaaaagaaatc
aagcaagatatctccagccttcgttatgaacttttggaagacaagagccaagcaactgag
gaattagccattctaattcataaacttagtgagaaactgaatcccagcatgctgagatgt
gaatga
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