Nomascus leucogenys (northern white-cheeked gibbon): 100596689
Help
Entry
100596689 CDS
T03265
Symbol
PCDH15
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nle03037
]
100596689 (PCDH15)
04515 Cell adhesion molecules [BR:
nle04515
]
100596689 (PCDH15)
Cilium and associated proteins [BR:
nle03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100596689 (PCDH15)
Cell adhesion molecules [BR:
nle04515
]
Cadherins
Protocadherins
100596689 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_CELSR2_9th
Cadherin_FAT4_N
PRIMA1
Motif
Other DBs
NCBI-GeneID:
100596689
NCBI-ProteinID:
XP_030665165
Ensembl:
ENSNLEG00000011914
LinkDB
All DBs
Position
3:complement(49493823..50473345)
Genome browser
AA seq
1818 aa
AA seq
DB search
MFQQFYLRTCLASGIILGSLFEICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNSDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPVFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV
TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGS
NGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAPLAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDSVTYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPGGTSTATVNIVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGAVHPRHSALTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQ
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRIDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELATKGTMVGVISAAAVNQSIVYSIVSGNEEDTF
GINNITGIIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNH
PPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAAPAPAPVAAPPPPPP
PPGAHLYEELGDSSMRGYGSEQQQLLRPSLLKPEELSMESGIDPGQEYGQDYYSYEHGYE
MPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEEEPKKIKKPKVEIREPSEEEEVVVTI
EKPPAAEPTYTTWKRARIFPMIFKKVRGLADKRGIVDLEGEEWQRRLEEEDKDYLKLTLD
QEEATESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESES
TESEGEKARKNIVLARRRPIVEEVKEVKGRKEEPQEEQKEPKVEEEEHSEEEESGPAPVE
ESTDLEAQDIPEEGSAESASVEGGVESEEESESGSSSSSSESQSGGPWGYQVPAYDRSKN
ANQKKSPGANSEGYNTAL
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacagttttatctccggacatgtttagcttcagggatcatcctgggctctctc
tttgaaatctgcttgggccagtatgatgatgattgcaaactagctaggggaggaccacca
gctaccatagttgctattgacgaagagagtcggaatggtacaattctggtggacaacatg
ctgatcaaagggactgctggaggaccagaccccaccatagaactttctttaaaggataat
gtggattactgggtgttgatggatcctgttaagcaaatgcttttcctgaacagcaccggg
agagttctggatagagatccaccgatgaacatacactccattgtggtgcaggtccagtgc
atcaacaaaaaagtgggcactattatctaccatgaagtgcgaatagtggtgagagacagg
aatgacaactcacccactttcaagcatgaaagctactatgccacagtgaatgagctcact
ccagttggtaccacaatattcacaggattttcaggagacaatggagctacagatatagat
gatggaccaaatggacagatagagtatgttattcagtataattcagatgatccgacatcc
aatgacacatttgaaattcccctaatgttgactggaaatatagtgttaaggaagaggctc
aactatgaagataagactcgctactttgtcataatccaagctaatgaccgtgcccaaaat
ctgaatgagaggcgaaccaccaccaccactctcacagtggatgttctggatggagatgac
ttgggtccagtgtttcttccttgtgtccttgtgccaaacactcgtgattgccgtccactc
acttatcaagctgccatacctgagttgagaactccggaagaactgaaccccattattgtt
acgccaccaatccaagccattgatcaggaccggaatattcaaccaccatcagataggcca
ggaatcctctattccatccttgttgggactcctgaggattacccacgatttttccatatg
catcctaggacagcagaacttagtctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaagacaatggtcatcctcttcctgcctttgccagt
ctacacattgaaatactggatgaaaacaatcaaagcccatatttcacaatgcccagttat
caaggctatatcctggaatctgccccagtgggagcaaccatttcggacagtctcaatttg
acctcacctttaagaatagtagctctggacaaggacatagaagatacaaaagacccagag
cttcacctttttctgaatgactacacctcagtcttcaccgtcacacagactggtattact
cgctacctcaccttacttcaaccagtggacagggaagaacagcaaacttacaccttttcg
ataacagcatttgatggtgtacaagaaagtgagccagtcatcgtcaatattcaagtgatg
gatgcaaatgataacacgccaaccttccctgaaatatcctatgatgtgtatgtttataca
gacatgagacctggggacagtgtcatacagctcactgcagtcgacgcagacgaagggtca
aatggggagatcacatatgaaatccttgttggggctcagggagacttcatcatcaataaa
acaacagggcttatcaccatcgctccgggggtggaaatgatagtcgggcggacttacgca
ctcacggtccaagcagcggataatgctcctcttgcagagcgaaggcactccatctgcact
gtgtacattgaagtgcttccaccaaataatcaaagccctcctcgcttcccacagctgatg
tatagccttgaaattagtgaagccatgagggttggtgctgttttattaaatctacaggca
actgatcgagagggagactcagtaacgtatgccattgagaatggagatcctcagagagtt
tttaatctttcagaaaccacggggattctaaccttagggaaagcactggacagggaaagc
actgatcgctacattctgatcatcacagcttcagatggcaggccaggtgggacctcaact
gccacagtaaacatagtggtgacagatgtcaatgacaatgctccagtgtttgatccttat
ctgccaagaaatttatctgtggtggaggaagaagccaatgcctttgtgggtcaagtaaaa
gcaacagaccctgatgctggaataaatggtcaagtgcactacagtttgggtaactttaat
aatctttttcgtatcacatccaatgggagcatttacacagcagtgaaacttaaccgagaa
gtcagggactactatgaacttgttgttgtggcaacagatggagcagtgcaccctcgtcat
tcagctctaaccctggccatcaaggttttggacattgatgataacagtcctgtgttcact
aattcaacatacactgtccttgttgaagagaatctgccagctgggaccaccatccttcaa
atagaggccaaagatgtcgaccttggagcaaatgtatcttaccggataagaagcccagaa
gtgaagcacttttttgcactacatccatttacaggagaactatcccttttaaggagttta
gattatgaggcatttccagaccaagaagcaagtatcacttttctggtagaggcctttgat
atttatggaacaatgccacctggtattgctactgtcacagtgattgtaaaggatatgaat
gattatcctcctgtctttagtaaacgaatatacaaagggatggtggctccagatgcagtc
aagggtacacctatcacaacagtttatgctgaagatgcagaccctcctggattacctgca
agtcgtgtgaggtatagaatagatgatgtccagtttccttaccctgccagtatttttgat
gtggaagaagattctggaagagtaataacacgagtcaaccttaatgaagaacctacaaca
atttttaagttggtggtggttgcttttgatgatggggagcctgtgatgtccagcagtgcc
acagtgaagattcttgtcttacatcctggtgagatcccacgcttcacacaggaggaatat
agacctcctccagtaagtgaacttgccaccaaagggaccatggttggtgtaatttctgct
gctgccgttaatcaaagtattgtgtactccattgtttcaggaaatgaagaagatacattt
ggaattaataacatcacaggtattatctatgtgaatggacctctggattatgagaccagg
acaagctatgtacttcgagtccaagctgattccctggaagtggtccttgccaatctccga
gttccttcaaaaagcaatacagctaaagtatacattgagattcaggatgaaaataatcat
cccccagtgtttcagaaaaaattttacatcggaggtgtatctgaagatgcaagaatgttt
acttctgtactcagagtgaaggctactgataaagatactggcaattatagtgtcatggcc
tacagactcataataccaccaattaaagaaggaaaagaaggatttgtagtggaaacatat
acaggccttatcaaaactgctatgctcttccataatatgaggagatcctacttcaagttt
caagttattgcaactgatgactatgggaagggactgagtggcaaagccgatgtactcgtc
tctgtggtcaatcagctggacatgcaagtcattgtttccaatgtgcctcctactctagtg
gaaaaaaagatagaagatcttacagagatcttggatcgctatgttcaggaacaaattcct
ggtgccaaggtcgtagtggagtccattggagctcgccggcatggagatgccttttcccta
gaagattacaccaaatgtgacttgaccgtctatgcaattgacccccaaaccaacagagcc
atcgacagaaatgagctttttaaatttttggatggcaaactacttgatatcaataaagac
tttcagccgtattatggggaaggcggacgcattctggagatccggactccagaggcagtg
accagcattaaaaagagaggagaaagtctaggatacacagaaggggccttgttggctctg
gccttcatcatcatcctctgctgcattcctgccatcttggtggttttggtcagctacaga
cagtttaaagtacgtcaagctgagtgcacaaagactgcacgaattcaggccgccttaccc
gcggctaaaccagcagcgccggcccctgcaccagtggcagcgcccccgccgcctccgcct
ccgccaggtgcgcacctctatgaagaacttggagacagctcaatgagaggttatggatca
gagcaacagcaactgctgaggccctctcttcttaaaccagaggaattatccatggagtct
ggaattgatcctggccaggaatatggacaagattattacagttatgagcatgggtatgaa
atgcctcaatatgggagtcgccgtcgattgttaccaccagctggacaggaggaatatggg
gaggtggttggtgaagctgaggaagaatatgaggaggaagaggaagagccaaagaaaatt
aaaaaaccaaaagttgaaattagagagcctagtgaggaggaagaagtagttgtaactatc
gaaaaaccaccagcagcagagcctacatacacaacatggaagagagccaggatattccca
atgatttttaagaaagttagaggattagctgataaaagaggaatcgttgaccttgagggt
gaagagtggcagagacgccttgaggaagaagacaaagattatttgaaactcacgctggac
caagaggaagcaacagaaagcactgtagaatcagaggaggaatcctccagcgactatact
gaatacagtgaagaagagtctgagttcagtgagtctgagactacagaagaggaatctgag
tcagagacaccctctgaggaggaggagagttctacccctgaatcagaagaatccgaatcc
acagagtcagaaggagaaaaagcaaggaaaaacattgtgcttgcaagaaggcggcccatt
gttgaggaggtcaaggaagtcaagggtaggaaagaggagccacaagaagaacaaaaagaa
cctaaggtggaagaagaagaacactcagaagaagaagaaagtggaccagccccggtggaa
gaaagtacagaccttgaagctcaagatatccctgaagagggcagtgcagaatcagcttcg
gtggaaggaggtgtggaaagtgaggaggaatcagaatcaggtagtagtagcagtagtagc
gaaagtcagtctgggggtccatggggctatcaggtaccagcgtacgacagaagcaagaat
gcaaaccaaaagaagtcgccaggagcaaactccgaaggttacaacacagcactttaa
DBGET
integrated database retrieval system
