Nomascus leucogenys (northern white-cheeked gibbon): 100601000
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Entry
100601000 CDS
T03265
Symbol
APOBEC3G
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3G
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03250
Viral life cycle - HIV-1
nle05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100601000 (APOBEC3G)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100601000 (APOBEC3G)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100601000 (APOBEC3G)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100601000 (APOBEC3G)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
AID
Motif
Other DBs
NCBI-GeneID:
100601000
NCBI-ProteinID:
XP_030671040
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All DBs
Position
7b:complement(59442451..59455524)
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AA seq
566 aa
AA seq
DB search
MVDGMDPHTFSYNFNNRPILSRRNTVWLCYEVKTKDPSRPRLDTEIFRGKVYSKLKYHAA
MRFLHWFSNWRKPHGDQEYEVTWYVSWSPCTKCTRKVTTFLAEDPKVTLTIFVARLYYFW
KPDYQEALRSLCQKSDGARATMKIMNYDEFQHCWNKFVYNQRELFEPWNNLPKHYILLHI
MLGELLRHLMDPRIFTSNFNNEPWVRGRHETYLCYEVERLHNDTWVLLNQHRGFLRNQIP
DIHGFPEGRHAELCFLDLISLWKLDPAQDYRVTCYTSWSPCFSCAQEMAKFISNNKRVSL
CIFAARIYDDQGRYQEGLCTLDSPRAKISVMTYSEFKHCWDTFVDCQGCPFQPWDGLQEH
SQALSGKLRAILGGGAPTVVAEPGPRTQLHGLQTQVEPPFWSQGDPGWDQGESQLKPAPV
KEAILPAPIPAAHMGTSSFLSPGTFPGLWWKLQWDCCQIAWFISWSPSPDHVVKVAEFLA
KHNKVKLSIFTARLYHDCDPGFQHGLRRLQDKGARNLNTVEKTVYKRDAPCQSRKGQPEN
YPSPVTKLEGSLTADPLAPLSSSSAS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggtggacggaatggatccacacacattctcctacaactttaataatagacccatcctt
tctcgtcggaataccgtctggctgtgctacgaagtgaaaacaaaggatccctcaaggccc
cgtttggacacagagatctttcgaggcaaggtgtattccaagcttaagtaccatgcagcg
atgagattcctccactggttcagcaattggaggaagccgcatggtgaccaggagtatgag
gtcacctggtatgtatcctggagcccctgcacaaagtgtacaaggaaggtgaccacgttt
ctggctgaggacccgaaggttaccctgaccatctttgttgcccgcctctactacttctgg
aagccagattaccaggaggcgcttcgcagcctgtgtcagaaaagtgacggtgcgcgtgcc
accatgaagatcatgaattatgacgaattccaacactgttggaacaagttcgtgtacaac
caaagagagctatttgagccttggaataatctgcctaaacattacatattactgcacatc
atgctgggggagcttctcagacacttgatggatccacgcatattcacttccaactttaac
aatgaaccttgggtcagaggacggcatgagacttacctgtgttatgaggtggagcgccta
cacaatgacacctgggtcctgctgaaccagcacaggggctttctacgcaaccagattcca
gatatacacggtttccctgaaggccgccatgcagagctgtgcttcctggacctgatttcc
ttgtggaagctggacccggcccaggactacagggtcacctgctacacctcctggagcccc
tgcttcagctgtgcccaggaaatggctaaattcatttcaaataacaaacgtgtgagcctg
tgcatcttcgctgcccgcatctatgatgatcaaggaagatatcaggagggcctatgcacc
ctggatagtcctagggccaaaatttcagtgatgacatacagtgaatttaagcactgctgg
gacacctttgtggactgccagggatgtcccttccagccctgggatggactacaggagcac
agccaagccctgagtgggaagctgagggccattctgggaggcggggcccctacagtagtg
gcagagccgggaccccggacacagctgcatgggctccagacccaagtggaacctccattc
tggtcccagggtgacccgggctgggaccagggtgaatctcagctgaagcctgcacctgtg
aaggaggccattctccctgctcccatccctgccgcccacatgggaaccagctccttcctg
tccccggggacctttcctgggctctggtggaaactccagtgggattgctgccagatcgcc
tggttcatatcctggagccccagcccggaccatgtggtgaaagtggccgagttcctggcc
aagcacaacaaagtgaagctgagcatcttcaccgcccgcctctaccacgactgtgacccg
ggattccagcatgggcttcgtagactgcaggacaaaggggcacgtaatttgaacactgtt
gagaagactgtgtacaagagagatgcgccatgtcagtctcgcaagggacagcctgaaaac
tacccatctccggtcaccaagttggaggggagcctcacagctgatcccctcgctcctctc
agctcctcctcagcctcctga
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