Candidatus Nitronauta litoralis: G3M70_10100
Help
Entry
G3M70_10100 CDS
T07016
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nli
Candidatus Nitronauta litoralis
Pathway
nli01501
beta-Lactam resistance
nli01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nli00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G3M70_10100
01503 Cationic antimicrobial peptide (CAMP) resistance
G3M70_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nli03036
]
G3M70_10100
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nli02000
]
G3M70_10100
01504 Antimicrobial resistance genes [BR:
nli01504
]
G3M70_10100
Chromosome and associated proteins [BR:
nli03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
G3M70_10100
Transporters [BR:
nli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
G3M70_10100
Antimicrobial resistance genes [BR:
nli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G3M70_10100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
HH_MFP_RND
Beta-barrel_RND
HH_AAEA_pHBA
YknX_C
BSH_CzcB
HH_EMRA
BSH_CusB
HH_YBHG
CzcB_C
OEP
BSH_YhbJ
TP096X_C
MscS_porin
Lipoprotein_17
DUF2957
RibLong
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QPJ62203
LinkDB
All DBs
Position
complement(2211687..2212895)
Genome browser
AA seq
402 aa
AA seq
DB search
MIQKRNSILLNKKNQFFIYLGILLTTTLMGCQQEKSAATPEPKRPPPAVTVAPVVLEKVI
RTHELVGRTTPVKTVKLVARVTGYLEKRNFKEGEDIAKGDLLFIIEQEPYRIAVRAAEAN
VVKAQATLENAKTYLKRVRSVRRGAVSQSDLDKAQSDVLTAEASMLEAQANLEKAELNLS
YTEIRSPFNGRIGLVTVNEGNLVSPETGALATLVQMDPMYVLFTVSSAAVLTEFQNQIKK
GKATTFTPKIMLPNGTFYPFEGLEDFVSHIVDEKTGTITIRAVFSNPSKNVIPGKANIPH
TIRLLMPGQFVKVIVQRDEVRSEKVIPQIAIQEDQQGKFVLIVDSENRVHKRPIKVGEKH
GVKWIVKEGLEVGERVISEGLQKVRPGVTVDTSSSALKPGNK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaaacggaattcaattttgctgaataaaaaaaatcagttctttatatattta
ggcattttactgacgaccactttaatgggatgccaacaggaaaaaagtgcagccactccg
gaacccaaacggcccccacctgctgtaacggtggctcccgttgttctcgaaaaggtcatt
cgcacccatgagctggttgggcgcacaacaccagtcaaaacggtgaagctggtagcccgt
gtgacggggtaccttgaaaagagaaattttaaggaaggggaggatatcgccaaaggcgat
cttcttttcattatagaacaggagccgtatcgaatcgcggtaagagcggcagaggccaat
gtagtgaaagcccaggccacgttggaaaatgccaaaacctatttaaagcgcgttcgttcc
gttcgaagaggggctgtgtcccaatccgatctggacaaggcacagagtgatgttcttaca
gctgaagccagtatgctggaagcccaggccaatctggaaaaagcggagttgaacctgagc
tacaccgaaatccggtcccccttcaatggtcgcataggtcttgtaacagtcaatgaaggc
aatctggtctcgccggaaaccggcgccctcgccaccctggttcaaatggacccgatgtat
gtcctttttaccgtgagttccgctgctgtactcactgaatttcaaaaccagataaagaaa
ggaaaggccacaaccttcactcccaagatcatgttgcccaatggaactttctatcccttt
gagggcctggaggattttgtcagccatattgtggatgaaaaaacggggacaatcacaatc
cgcgctgtattttcaaaccccagtaagaatgtaatacctggcaaagccaatataccccac
actattcgtctgctaatgccagggcagttcgtcaaagtgattgtacagcgcgatgaagtt
cgctccgagaaagtcattccccagatcgcgattcaggaagaccagcaaggtaagttcgtc
ctgatagtcgacagcgagaaccgtgttcacaagcggcccatcaaggtcggagaaaaacat
ggggtgaagtggatcgttaaggaaggactggaagtcggagaacgggtcatttcggaaggg
ctccagaaagtgagacccggggtaaccgtcgacacttcatcatccgcgctcaagcctgga
aataaataa
DBGET
integrated database retrieval system
