Nostoc linckia: NIES25_10480
Help
Entry
NIES25_10480 CDS
T10227
Name
(GenBank) putative multidrug efflux pump, HlyD family protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nlk Nostoc linckia
Pathway
nlk01501
beta-Lactam resistance
nlk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES25_10480
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES25_10480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlk03036
]
NIES25_10480
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_10480
01504 Antimicrobial resistance genes [BR:
nlk01504
]
NIES25_10480
Chromosome and associated proteins [BR:
nlk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES25_10480
Transporters [BR:
nlk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES25_10480
Antimicrobial resistance genes [BR:
nlk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES25_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
YknX_C
RND-MFP_C
BSH_CusB
CzcB_C
HH_MFP_RND
DUF3584
Biotin_lipoyl
DUF6841
Beta-barrel_RND
Motif
Other DBs
NCBI-ProteinID:
BAY74634
LinkDB
All DBs
Position
complement(1213711..1215144)
Genome browser
AA seq
477 aa
AA seq
DB search
MDTQENTKIADSDVTSTAAKTQKSRFSSITIIGTTTFVVTGLLALGIIPRIQQQSELNAF
AKATTKKVSGVNVVKPKLAANFTELVLPSNIQASQETTIYARTSGYLQKKLVDIGDRVNK
GQLLAVIDAPETDQDVEQARAELAKSEANIAQVQADLAQKQSNLSQTRANFKARQAELIE
ARTNLELARQTWQRWQLLQNQGAVTTQAADERESAYNASQANVETLIARVNSEQESINTA
LAAINSQKANINAFVASKNAAQSNLQRIKVLQSFKQIVAPFSGVITARNIDTGALISAGS
NSNSGNSWLFKVAQTDNLRIRINVPQAFVQSIQPGQTALVRVRELPKKSFSGKVIRTADA
LDASSNTLLTEIELRNSENVLRPGMYAEVTFKAQRVNPPLLVPANTLVINADGIQVATVT
KENKVSYKKVELGRDYGTEVEVVSGLSPNARLITNPTDALQEGKSVQVLASKPKTKS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatactcaagaaaataccaaaattgctgattccgatgtcacatcaactgcggcaaaa
actcaaaaaagccgcttcagttctatcactattattggtacaactacttttgttgtcact
gggcttttagcgcttggtattatacctcggatacaacagcaatcagaattaaatgctttc
gctaaagctacaaccaaaaaagtttctggtgttaatgtggttaaacccaagcttgcggct
aattttacagagttagtcttgcctagtaatattcaagcaagccaagaaaccacaatttat
gctcgtaccagtggctacttacaaaaaaagttagtggatattggcgatcgcgtcaacaaa
ggacagttactcgctgtaattgatgcacctgaaactgaccaagatgtagagcaagctcgt
gcggaattagcaaagtctgaggcgaatattgctcaagttcaggcagatttagcacaaaag
caaagtaatctttcgcaaacaagagccaacttcaaagctagacaggctgaattgattgaa
gcacggactaacctagaactagcgcgtcaaacttggcaacgttggcaattacttcaaaac
caaggagcagtgactacacaagctgctgatgaacgtgaaagtgcttataatgcaagtcaa
gctaatgtagagactttaattgctcgcgttaattcagagcaagaaagtataaatactgct
cttgcggctattaattctcaaaaggcgaatattaatgcctttgttgcgagtaaaaatgct
gctcagtccaacttgcaacgaataaaagttttacaatcattcaaacaaattgttgctcct
ttttcaggtgtaattactgctcgtaatatagacacaggagctttaatttctgccgggagc
aatagtaatagtggaaattcgtggctatttaaagttgctcagacagacaatttacgtatc
cgaattaatgttccccaggcttttgttcaatcaattcaacccggacaaactgccctcgtt
cgcgttcgcgaactaccgaaaaaatctttttctggtaaagttattcgtactgctgatgcc
ttagatgcctcttccaatacccttttaactgaaattgaattacggaattcagaaaatgtg
ttgcgtcctggaatgtatgctgaagttacttttaaggctcaacgtgtcaatccaccttta
ttagtaccagctaataccttagtgattaatgcagatggtatacaagtagctactgtgaca
aaagaaaataaagttagctacaagaaagtagaacttggacgagattatggtactgaagtt
gaagtagtttctggtttaagccctaatgcgaggttaattactaatcctacggatgctctc
caagaaggtaaatcagttcaggtacttgcatctaagcctaaaactaagagttaa
DBGET
integrated database retrieval system
