Nostoc linckia: NIES25_66060
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Entry
NIES25_66060 CDS
T10227
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nlk Nostoc linckia
Pathway
nlk01501
beta-Lactam resistance
nlk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES25_66060
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES25_66060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlk03036
]
NIES25_66060
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_66060
01504 Antimicrobial resistance genes [BR:
nlk01504
]
NIES25_66060
Chromosome and associated proteins [BR:
nlk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES25_66060
Transporters [BR:
nlk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES25_66060
Antimicrobial resistance genes [BR:
nlk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES25_66060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_YBHG
BSH_RND
BSH_CzcB
YknX_C
BSH_YknX
RND-MFP_C
HH_MFP_RND
Biotin_lipoyl
CzcB_C
DUF1090
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
DUF4131
Beta-barrel_RND
HTH_3
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
BAY80118
LinkDB
All DBs
Position
plasmid1:complement(1650128..1651753)
Genome browser
AA seq
541 aa
AA seq
DB search
MSNSEFPESSFPVEIEQPAVNDSSQESRSLPGSPKSPKKRRWSVVLGIILLIAGVGFGWR
WWQTSSASNGASGNQAAPAQPPAIPVKLAIVETETTQESSQFLGSLEAPRSVLIKPQIEG
RITQIFVQEGNRVQQGQVIFTLQSDDAQAQLLQARGSLQQAQARLAELVAGTRREEVAQA
RAQLAQAQARLRDAQAGAQPQEIAQAEAQIQSAKSDLELAQSRAKRYEQLRKEGAVSQDT
LEGYVKEQRSAEADLVVAQKRLDQLRQSRNSSINELAAAVEQQQQNLRQLENGSRPEEIA
QARSQVTQAAGQVQAAQVQLQYTKVIAPFTGIVGDIPTKVGDYVQRADQLTTLTRNDSLE
LNISVPLEEAKKLRLGLPVQMLDAQGKAIATGKVSFISPDASLDSQTVLAKANFGNSTRQ
LLNRQSVQTKVIWDERPGILIPVTAVSRLGGETFVFVAEAPAQNTKPEASKAEAPAQNSK
PGAPKLVAQQKPVKLGAIEGNSYQVIEGLKPGDKIVVSGILNLTNGAPISPAPETVGSRN
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtccaattctgagttccctgaatcttcttttcctgttgaaatagaacagcctgctgtt
aatgattccagtcaagagtccagatcgttaccaggatcgcccaaatcacctaaaaagcgg
cgttggtctgtggtgttgggaattatcctgttaatcgcaggtgttggttttggttggcgg
tggtggcaaactagcagtgccagcaatggagcatcaggcaatcaggccgctcctgctcaa
cctccggcaattcccgtgaagctagcaattgtagagacagaaactacacaagaaagttcc
cagtttcttggctccttagaggctcctcgttcggtactcattaagccacagattgaagga
cgaattactcagattttcgtccaagagggcaaccgagtacaacaagggcaagttattttt
actttgcaaagcgatgatgcccaagctcagttattacaagctagaggctcactccaacaa
gcccaggcgcgtcttgccgaacttgtagcgggtacccggcgagaagaagttgcccaagct
agagcgcagttagcccaagcccaagctcgtcttagagatgcccaagcgggagcgcagcca
caagaaattgctcaggctgaggctcaaatccagtcagctaaatctgatttggaactggca
cagtcacgagccaaacgatacgagcaattgagaaaagaaggtgcagtttcccaagatacc
ttagaaggatatgtcaaggaacagcggagtgctgaagctgacctcgtagtagcccaaaaa
cgtttagaccaactccgccaaagtagaaactctagtatcaatgagctagctgctgctgta
gaacaacagcaacagaacttaaggcagttggaaaatggctctcgcccagaagaaattgcc
caagcgcgatcgcaagttactcaagcagcaggtcaagtccaagctgcccaagtgcaactg
caatatacaaaagtcatagctccttttactggcattgtcggcgatattcccacaaaagtc
ggagattacgtacaaagagcagatcagctcaccacattaactagaaatgactcattagaa
ctgaatatttccgttcccctagaagaagccaaaaagttgcgcttgggattacccgtacaa
atgctcgacgcccaaggcaaagccatagccacaggtaaagtcagcttcatctccccagat
gcgagtttagattcccaaacagttctagccaaagccaactttggcaattcaacaaggcaa
ctgctcaatcgccagtcagtacaaaccaaagtcatttgggacgaacgcccaggaatttta
attccagtgacagcagtatctcgtttgggtggagagacattcgtctttgtggctgaagca
ccagcgcaaaacactaaacccgaagcgtcaaaagctgaagcaccagcgcaaaactctaaa
cccggagcgccaaaattggtagctcagcaaaaacctgtaaagctgggagctattgagggc
aatagttatcaagtgatcgaaggactaaaacctggtgacaaaattgttgtttctggtatt
ctcaacctcactaatggcgcccccattagccctgcaccggaaacagtcggtagtcggaat
ttttaa
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