Neisseria leonii: ORY85_01425
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Entry
ORY85_01425 CDS
T10281
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nln Neisseria leonii
Pathway
nln03030
DNA replication
nln03410
Base excision repair
nln03420
Nucleotide excision repair
nln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ORY85_01425 (ligA)
03410 Base excision repair
ORY85_01425 (ligA)
03420 Nucleotide excision repair
ORY85_01425 (ligA)
03430 Mismatch repair
ORY85_01425 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nln03032
]
ORY85_01425 (ligA)
03400 DNA repair and recombination proteins [BR:
nln03400
]
ORY85_01425 (ligA)
Enzymes [BR:
nln01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ORY85_01425 (ligA)
DNA replication proteins [BR:
nln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ORY85_01425 (ligA)
DNA repair and recombination proteins [BR:
nln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ORY85_01425 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ORY85_01425 (ligA)
MMR (mismatch excision repair)
DNA ligase
ORY85_01425 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ORY85_01425 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
DUF1803
Motif
Other DBs
NCBI-ProteinID:
WWV75086
LinkDB
All DBs
Position
281407..283866
Genome browser
AA seq
819 aa
AA seq
DB search
MNPNERIRELTERLNRYAYEYHTLDAPTISDAEYDRLYRELEALEAAHPQLKLPDSPTLR
VGGAPLDGFESVRHEVPMLSLSNAFSPQDADGVFNHAEMLAFDERVRGGLDGRQPEYVIE
PKFDGLAVSLLYGNGVLLRAATRGDGAVGEDVTLNVKTIAGVPLRLYGAEIPDMIEVRGE
VLMLKADFAALNQRQEAAGQKLFANPRNAAAGSLRQLDSRITAQRKLHFFAYGIARQEGG
LAAQEHIQELAYLRELGFSLPYGHFGCFKNIGEVLDFYEQMLQKRPELPYEIDGMVVKVN
RLAEQRELGFISRAPRWAVAHKFPAEEALTVVEAIDVQVGRTGAVTPVARLQPVFVGGVT
VTNATLHNEGEAQRKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRETAANVSDGIQGDM
FAALAERPSESEQAAEPVYPRYRLPEHCPICGSRIEREEGEAVARCSGGMLCRAQRAQGL
IHFASRKAMDIEGLGQRQIELLVAQDLVTRFADLYRLDIPTLQQMKEQADQAGKTDETAD
GAFSDGLKAAKKQPPVKWAQNILAGIEASKQPELARFLFALGIRHVGERTAKSLAQAFGT
LDRVRRAPEPLLACLPDIGSVVAQSVAGFFAQSAQQEMIDGLLAAGVVPQEQPVTLPLAR
YAEPAKWLARLPDFKISEKRAAALWELAGQSIAGLLADNALAAEWQQWRSLPHNRRLLLD
IEAFLREMPSENAALPENTGMCAAAGKTFVLTGTLPTLKRDEAQAMIEAAGGRVSGSVSK
KTDYVVAGEAAGSKLEKAQALGVAVLDEAQLKILLAEAV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaacgaacgaatccgcgaattgaccgaacggctcaaccgttacgcctacgaa
taccacacgctcgacgcgcccacgatttccgatgccgaatacgaccggctttaccgcgaa
ctggaagcgctcgaagccgcacacccgcaactgaaactgcccgacagtcccaccctgcgc
gtaggcggcgcgccgttagacggtttcgagagcgtgcgccacgaagtgccgatgctgtcg
ctgtccaatgccttttcgccgcaggatgcagacggcgtgttcaaccatgccgagatgctg
gcatttgacgagcgcgtgcgcggcggtttggacggcaggcagcccgaatatgtgattgaa
ccgaaattcgacgggctggccgtcagcctgctgtatggaaacggcgttttgctgcgcgcg
gccacgcgcggcgacggtgcagtgggcgaagatgtcacgctgaacgtgaaaaccattgcg
ggcgtgccgctgcggctgtacggtgcggagatacccgatatgatcgaagtgcgcggcgaa
gtgctgatgctcaaagccgatttcgcggcattgaaccaacgtcaggaggcggccgggcaa
aagctgtttgccaatccgcgcaacgctgccgcaggcagcctgcgccaattggattcgcgc
atcacggcgcaacgcaaactgcactttttcgcctacggcatcgcgcgccaagagggcggc
ttggccgcgcaagagcatattcaagaattggcttatttgcgtgagttgggattcagcctg
ccgtacggccatttcggctgttttaaaaatatcggcgaagttttggatttttatgaacaa
atgctgcaaaaacgccccgaactgccgtatgaaatcgacggtatggtggtgaaagtgaac
cgtctggccgagcagcgcgagttgggctttatttcgcgcgcgccgcgttgggcggtggcg
cacaaattccctgccgaagaagccttaaccgtggtggaagcgattgacgtgcaggtgggg
cgtaccggcgcggtaacgcctgttgcccgcctgcaacccgtgtttgtcggcggcgtaacc
gtaaccaatgccacgctgcacaacgagggcgaggcgcagcgcaaagatgtgcgcgtgggc
gatacggtggtggtacgccgtgcgggcgacgtgattcccgaagtggtgcgcgtggtgttg
gaacgccgcccgatgcgtgagaccgccgcaaatgtttcagacggcattcagggcgatatg
tttgccgctttggccgaaaggccgtctgaatcggaacaggctgccgaacccgtttacccg
cgctaccgcctgcccgaacactgcccgatttgcggcagccgcatcgagcgcgaagagggc
gaagcagtggcgcgctgcagcggcggtatgctgtgccgcgcccagcgcgcgcagggactg
attcattttgcctcacgcaaagcgatggacatcgaaggcttggggcagcggcagattgaa
ctcttggtggcgcaggatttggtaacccgctttgccgatttgtaccgtctcgatattccg
accctgcaacagatgaaagagcaggccgatcaggcgggaaaaacggacgaaacggcagac
ggcgcgttttcagacggcctcaaagcggcaaaaaaacagccgcccgtgaaatgggcgcaa
aatattctggcagggattgaagcgagcaaacagcccgaattggcgcgttttctgtttgcg
ctgggcatacgccatgtcggcgagcgcaccgccaaatcgctggcgcaggcattcggcacg
ctggacagagtgcgccgcgcgcccgaaccgctgctggcctgcctgcccgacatcggcagt
gtggtggcgcagtctgtggccggtttttttgcccaaagcgcgcagcaggagatgatagac
ggcctgctcgccgccggtgtggtgccgcaggagcagcccgttaccctgccgcttgcccgc
tatgccgaacccgccaaatggctggcccgcctgccggatttcaaaatcagcgaaaagcgc
gcggccgccttgtgggaattggccggacagagcatcgccggattgttggcagataacgcg
ctggcggccgaatggcagcagtggcgcagcctgccgcacaaccgccgcctgctgctggat
atagaggcctttttacgggaaatgccgtctgaaaacgccgccctgcccgaaaataccggc
atgtgtgccgctgcgggcaaaacctttgtgctgaccggcacgctgcccacgctcaaacgc
gatgaagcgcaggccatgattgaagcggcgggcggcagggtgtccggcagcgtatcgaaa
aaaaccgactatgtcgtggcgggcgaagcggcggggagcaagctggaaaaagcgcaggct
ttgggcgtggccgtgctggacgaggcgcagctgaaaatactgctggcagaggccgtctga
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