Neodiprion lecontei (redheaded pine sawfly): 107218496
Help
Entry
107218496 CDS
T09006
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nlo01001
]
107218496
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nlo04090
]
107218496
Enzymes [BR:
nlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107218496
Protein kinases [BR:
nlo01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
107218496
CD molecules [BR:
nlo04090
]
Proteins
107218496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
TCAD9
Kinase-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
107218496
NCBI-ProteinID:
XP_046599389
LinkDB
All DBs
Position
6:6312689..6340083
Genome browser
AA seq
1158 aa
AA seq
DB search
MDRTEFTCVIILVIVGLFNEGVAYSKPKIYPAEPYIVIQEGTDLNISCRGFRPIHFSVMN
VSGRNCSPSRTKPSESSGVHTSTFTVPNVTRTDAGWYACAEDGTEIRNDEQIVEHPNETI
SWIYVYVNSSKPFAVDDQIDGVTIIKPIWSSVVIPCRQTLPKMQIPTLEQAYVVVDPAVA
GFRYDPRIGFIKDKVTKSSSTDYSCISPPFEGRVGDEITYTVTITDIIMKPPLIDEDKLR
HLVRGRNQTLRCYITDETHDPNEETYYLTWKAPGAIPAERLRRENTIGKEAVLTIVDVRE
TDSGEYTCTVEGDGLDSASKSVNVKFYDPDEEYINVTDILSSTQTVSATKTALWEVDIDT
YPEGNITWLDTEKTEISNSTRYSHDVSGTKHTFQIRNVGIADFGSYTIRINYGNESNEHE
LELKVRAPPTAKIESAPNRSYKRNETQEFRCRISGYPLPNVTWRYSESAGPRSDNKSVET
IFPPTRKGSLENSPTGFLSFLKTSINATGGLTCRSCNEIDCAESTMTILVAGGQPPAEPS
AHKDVIWISSICGLIIIIIVVVICMGAKVNRERRLKKILFDSVLTHFEDGALECLNHDLT
VDEQAELLPYDKKWEFPREDLKLGKQLGSGAFGVVMKAEARGIRVAGETTIVAVKMVRRS
TDPSYLKALSGELKIMIHLGRHLNVVNLLGACTKTIRTKRELYVIVEYCRFGNLHQYLQR
HRATFIDQIDPLTKKIDPNIGMELLARRKIIASQNRSYDTELSRSISPQSSNGHSGTQMV
DYRQITQFDDVNMSHDPAVLSKNSVQPGWRSNYRGDYVEDNLNPVCTRDLLCWAWQVSRG
MEYLSSRNVLHGDLAARNILLADDNVVKICDFGLARNMYNDKNYTKKGDCPLPVKWMAIE
SIRDRIFSTQSDVWSFGIVLWEFFTLSRTPYPGMEAKEQYDQIIDGYRMEKPKYATEEIY
DIISNCWKETPNLRPSFSELAETIGTLLEENIRIHYANLNSPFENMNIETSRNGGSDYLT
MMSAPNHNHHISPNPALEGPPHSAYQPMTPVNTSGHDITYVTRPELHESHFKFPLLKEDA
PNNSDSEICIEPTPQVENETPLKPPITNLRGRYSNLQNVLQNQSLVNADISNEILNVSKN
MIKKLPSPLRGNHNQYIN
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaccgagtttacttgcgttattattttggtcatcgttggactttttaatgaa
ggtgtagcatattcgaaaccgaaaatctaccctgcagagccttatatcgtcatccaagaa
ggaaccgacttgaacatatcatgcagaggtttccgtcccatccatttttcagtcatgaat
gtttccggtcgaaattgttcaccgtcaaggactaaacccagcgaatcgtccggcgtgcat
acctccacgttcaccgtgcctaacgtaactcgaaccgatgccggatggtacgcttgcgcc
gaagacggaaccgagattcggaacgacgagcaaatcgtcgaacatcctaacgaaaccatc
agctggatctatgtatacgtgaattcgtcgaaaccatttgctgttgacgatcagatcgac
ggtgtaacgataatcaaaccaatttggagttccgtggtcataccgtgtcggcaaacgtta
cccaaaatgcagattccaacgcttgagcaggcgtacgtagtggttgacccggcagttgcc
ggttttcgatacgacccgagaattggattcatcaaagataaagtgactaaatcttcttcc
accgactacagctgtatatcgccaccgttcgaaggacgcgttggtgacgaaataacatac
acagtgacaataactgacattataatgaaacctccattaatcgacgaggataaactccga
cacttggtacgtgggcggaatcaaactctaaggtgttacatcactgatgaaactcatgac
ccgaacgaggagacgtattacctgacgtggaaagccccgggtgcgataccagcggagaga
ttgcggcgcgagaatactattggaaaggaagctgtgttgacgatagtagatgtgcgggaa
actgatagcggggaatatacttgcactgtcgaaggagatggccttgattctgcttccaaa
tcagtcaacgttaaattttatgaccctgatgaagagtacatcaatgtgactgacattttg
tcctcgacccaaaccgtaagtgcaacaaaaacagcgctttgggaagttgacattgacacg
tatcctgaaggaaatattacatggctcgatacggaaaaaacagaaatttccaattcaacc
cggtactcgcacgatgtatccggaacaaaacacacgttccaaatacgtaatgtgggaatt
gctgattttggcagttatacgattcgcatcaactatgggaacgaatcgaacgaacacgaa
cttgaattgaaggttcgagcgccaccaactgccaagatcgagtcggctccgaatcgttcg
tataaacgaaacgaaactcaggaattccgttgccggatatccgggtatccgttgccaaac
gtaacgtggcgttactcggaatccgccggtcctcgatcggacaataaatctgtcgagaca
atttttccgccaacaagaaaagggtcgttagaaaattccccaactggcttcctctcattt
ttgaaaacatcgatcaacgcaacaggtggtctgacatgcagaagctgcaatgaaatcgat
tgtgccgaatccaccatgacaatcctcgttgctggagggcaaccaccggcagaaccaagt
gcccacaaagatgtcatctggatcagctcgatctgtggcctcattatcatcatcatcgta
gtcgttatttgtatgggagccaaagtgaaccgtgaaagacgcctgaaaaagatattgttc
gactcagtattgacgcatttcgaagacggagcactggagtgtttgaatcacgacttgacc
gtggatgaacaagcggagttgttaccctacgacaagaaatgggaatttccgcgagaagat
ctaaaacttggcaaacaactgggaagcggagcgttcggcgtcgtgatgaaggctgaggcg
cgagggattcgcgtcgcgggtgaaacgacgattgttgccgtgaaaatggtccgacgatcg
acggatccgagttacttgaaagctctctcgggcgagctcaagatcatgatccacctcggc
cgacatttgaacgtcgtcaatcttctcggtgcctgcaccaaaactatccgcaccaagcgt
gaattgtacgtcatcgtggaatactgccgcttcgggaatttacaccaatatctgcaacgt
catcgagcaactttcatcgaccaaatcgatcccttgacaaaaaaaatcgatccgaatatc
ggtatggagttgttggccagaaggaaaatcatcgccagccagaataggtcttacgacacg
gaactgtcacgcagcattagtccacagtcatctaatggccatagtggtactcagatggtt
gattaccgccaaatcacacaattcgatgacgtgaacatgtctcatgaccctgccgttttg
agtaaaaattcagttcaacctggatggcgatctaattaccgaggcgactacgtagaggat
aatttgaatcccgtttgtacacgagatttgctctgctgggcttggcaggtatcgcggggc
atggaatatctcagcagtagaaacgttctacatggcgatttagcagcaaggaacatactc
cttgcagacgataacgtcgtaaaaatttgtgatttcggattggctagaaacatgtacaac
gacaaaaattatacgaaaaaaggagattgccctttgccggtgaagtggatggccatcgag
tcgatcagagaccgaatcttttcaactcagtcggatgtttggtcctttgggatagtcttg
tgggagtttttcaccttgtctcgtactccgtatcctggtatggaagccaaagaacaatat
gatcaaataatcgatggctatcgcatggaaaaaccgaaatatgcaacggaagaaatatat
gatattatatcaaattgttggaaagaaacacctaatttgcgtccttcgttttctgagcta
gctgaaacgattggaactctgttggaagaaaacattagaatccattatgccaatctgaat
tctcccttcgagaacatgaatatcgaaacttcgcgaaatggcggaagcgattatttgacc
atgatgtctgctccaaatcataaccatcacatttcacctaatccagcattggaagggcca
ccacactcagcttaccagcccatgactccagtcaacacaagtggccatgatatcacgtac
gtcactcgtccagaacttcatgaatcccattttaagtttcctttgctgaaagaagacgct
ccgaacaattctgattcggaaatttgtattgagccaacacctcaagtcgaaaatgaaacc
cctctcaaaccgccgatcacgaatctccgtggaagatattccaatctccagaatgtttta
caaaatcagtctttagtaaatgcggatatttccaacgagattctaaatgtttcgaaaaac
atgataaaaaagttgccttcgcccttgcgtggcaaccataatcagtacatcaattga
DBGET
integrated database retrieval system