Neodiprion lecontei (redheaded pine sawfly): 107221648
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Entry
107221648 CDS
T09006
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nlo03037
]
107221648
Cilium and associated proteins [BR:
nlo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
107221648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IFT122
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Beta-prop_THOC3
WD40
Beta-prop_EML_2
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Zn_ribbon_IFT122_C
NBCH_WD40
Zn_ribbon_IFT122
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
TPR_IF140-IFT172
Beta-prop_WDR90_POC16_2nd
TPR_GEMI5
WD40_MABP1-WDR62_2nd
TPR_IFT80_172
WD40_Gbeta
Beta-prop_IFT140_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
Beta-prop_VPS8
Beta-prop_Vps41
WDCP
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
107221648
NCBI-ProteinID:
XP_015516203
UniProt:
A0A6J0BQQ6
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Position
2:2458634..2464240
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AA seq
1179 aa
AA seq
DB search
MRSHPTWVDKVQDKTDQCIYDLCFNPDGTQLIVAAGSQVLVYETNDGALVQPLKGHKDVV
YCVCYARDGKKFASGSADKSVIIWTSKLEGILKYSHSEAVQAMQFNPVSHQLLSCALSDI
AFWSTEQKAVQKLKSGGRVNCCAWTKDGQYLAIGLALGYVSIRNKNGEEKTRIDRAGGTP
IWSLSWSPLKDDSVDVLCVADWGGGLSFYTLAGKTVSRDRSLNFIPLNVAYFPDGQYILV
AGSNKRCLLMTHDGIQLASIGDTFSSWVWSCAVHPGSSHVAIGCQDGTITYSQLSWNTVH
GLYGDRYAYRENMTDVIIQHLVTNQKVRIKCKDLVCRIAVYRDRLAVQLPERVIIYEPSG
NSEGMHYRIRDKLPQSLNCNLLVVTTNHLVLCLDKRLQSLTFTGIIEREWILDGVITYIK
VAGGPSGQECIIAGLKTGYVSKIYLDNPFPAQLAKVEGAIHCLDISPLKEKLAVVSDTGL
LTVFDLNTEEILREIQDVTSVAFNSVFEDMMCYSGNDYLAVKVADFNEYKQKFSGFVVGH
NGSKLYCLNGAAILTVEVPMSSSMYQYLERGMFKEAFAIACLGVAEGDWLALGTAALDHL
ELNVAYAAFSRIKKLRYIDIVSEVEEKLNSGEWGREACMATAAAAMGKLREAARLYQKAG
LQQYALNMYSDLRMFDIAQEFITSGNTQDRTILLRRRAEWAKSLGEPRAAAEMFLTAGDV
QRAINIIAEYGWIDMLIKVGRQLDKAERDSLSMIAKKLRQLGATHGAAEIFSRLGDDPDV
ADVLIDAQAWPEAFELAERNPKLKSRVYGPYARWLAETGRFSEAQEAFQMAGQPEESISV
LTLLAKNAVAEKRFRDASYFYWILSQLSLDLSKRTDEIMATFQIYYDKADIYYAYNEVYK
YLEEPFTSLMPEALFNISRFLLMKTQDIQVEGVSQFTITYTLIKQARILGAHKLVTQLFE
RLRGMKIPASLLSQVEVSTLAARAYPYSDPEELLPLCYRCSTFNSLLPSNNIFGNKCVQC
GLKFQHSFVMFEILPIVEFELEEGITDEEAKRLIEEPRPLSDSSLISDNQLTIPTPVGDL
FTARLIRYEDKTGESRITVGRGVLASIEPSSVLIAHWPKPFKTRYFRNLLPDLQITLCKS
CLKLFHSDDYELAILRHGHCPFCRSSQLPRAEQITRHAT
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagatctcatcctacatgggttgataaagttcaagataaaacagaccaatgcatctat
gatctctgcttcaacccagatggaacccaattaatagtcgctgctggcagtcaagtcctt
gtctacgaaaccaatgatggtgcgcttgtacaaccactcaaaggacacaaagatgtcgtc
tattgcgtttgctacgcgagagatggaaagaagtttgcgtctggtagtgcagacaaaagc
gttattatatggacttccaagctcgaaggaatattaaaatactcccatagtgaagctgtt
caagcgatgcaatttaatcctgtctcgcaccagttgctcagctgtgcactttccgacatc
gcattttggtccactgaacagaaggctgtgcagaagctgaagtctggaggaagagtaaat
tgctgtgcttggacaaaggatggacagtacttggccattggacttgcgctgggatatgtt
tctatcagaaataagaacggagaagaaaagactcgaattgatcgtgcagggggaacgcca
atctggagtttgtcttggagcccattgaaggacgattctgtggacgtgttatgcgtcgct
gattggggcggcggtctttccttctacactctggctggaaaaacagtgagcagggacagg
tcgctgaatttcattccactgaatgtagcctactttcctgacggacaatacattcttgta
gctggcagcaataaacgctgtttattaatgacccatgacggcattcagctggcttcgatt
ggtgatactttttcatcctgggtatggagttgcgccgttcatccaggatcctcacacgtc
gccattggttgtcaagatggaacaataacgtattctcaattgtcctggaatactgttcac
ggcttgtacggagaccgatatgcatatcgagaaaatatgactgatgttataatccagcac
ctggttacaaatcaaaaagttcgaattaagtgcaaagatttggtctgtagaattgcagtt
tatcgagatagactcgctgtgcaattacctgaacgagtgatcatatatgaaccttcggga
aacagcgagggaatgcactatcgcatcagggacaaacttcctcagtccttgaattgcaat
ttgttagttgtaaccacaaaccatttggtactgtgcctagacaaacgactgcagagccta
acttttactggtattattgaaagagagtggattctcgatggcgttattacctatataaaa
gtcgccggtggtccatcaggtcaagaatgcatcattgcaggattgaaaaccggatacgtt
tcaaagatatatctcgacaatccgtttccagctcagctggcaaaagttgaaggtgctata
cactgtctagatattagcccactcaaagaaaagttagccgtagtaagcgacacgggtttg
cttacggtgtttgatctaaatacagaagaaatattacgagaaatccaagatgttacaagc
gttgcattcaattccgtgtttgaggatatgatgtgctactcagggaacgattacttggct
gtaaaagtcgctgattttaacgaatacaaacaaaaattttccggctttgttgttgggcat
aatgggtccaagttgtactgtttaaacggagcggcgatactgacggtagaggtaccaatg
tcatcatctatgtatcagtacctagaaagaggaatgtttaaagaagcttttgcaatagct
tgtttaggcgtagctgaaggtgattggctcgctttggggactgctgctctggatcactta
gaactgaacgtagcatacgcggcgttttcgcgtattaaaaaattacgttatatcgatatc
gtttctgaagttgaggaaaaattgaattctggggaatggggtcgagaagcttgcatggct
actgcggccgcggcaatgggaaaacttcgagaagctgcaagactgtatcagaaagctgga
cttcaacaatacgctcttaatatgtattcagatttgagaatgtttgatatagctcaagaa
tttatcaccagtggtaacactcaggaccgaacaattttactgaggcgaagagctgagtgg
gcaaaaagtttgggagaacctcgagcagctgcagaaatgttcctcactgctggagatgtt
caacgagccattaatatcattgctgaatatggttggatcgacatgctcatcaaagttgga
agacaactggataaggccgagagagacagtttgtctatgatagctaaaaaactgagacag
ttaggcgcgacgcatggcgctgctgaaatattcagtcgattaggagatgatcctgacgtc
gctgatgttttgatagacgcacaagcatggcctgaggcgttcgaactggcggaaagaaat
ccaaaactaaaatctcgcgtatatggaccatatgcaagatggttagctgaaactggtcgt
ttttctgaagctcaagaagcatttcaaatggctggtcaacctgaggaatcgatatctgtt
ctcacactgttagccaaaaatgctgtggctgaaaaaagattccgcgatgcttcgtacttc
tattggatcctttcacaactcagcctcgatttgagcaagcgtaccgacgaaataatggca
acttttcaaatatattatgataaagctgatatttactacgcatataacgaagtttacaaa
tatttggaagaaccattcacctcattgatgccggaggctttgttcaatatatctcgattt
ttgctaatgaaaactcaagatatacaagtcgaaggagtatcacagttcaccataacttat
acactgattaagcaagcgcgtattctcggtgcccataaattggtaacacagctctttgag
cgattacggggtatgaaaattcctgcaagtctattatcgcaagtggaggtctcaactttg
gcagctagggcttatccttacagcgatcctgaagaactcctacctctttgctaccgctgt
tctaccttcaattcacttctaccttccaacaacatttttggaaataaatgtgttcagtgc
ggacttaaatttcagcattcattcgtcatgtttgaaatattacctatagttgaatttgag
ttggaagaaggaatcactgacgaagaagccaaaagattaatcgaagagccaagacctctc
tctgatagttctttgatcagtgataatcaactcaccatacctacgcccgttggcgacctg
tttacagctcgcttgatacgatacgaggataagacaggcgaatcaagaattaccgttggt
cgaggtgttttagcaagtatagaaccgtccagcgtactaattgcacactggccaaaaccc
ttcaagaccagatatttcagaaatcttttgccggatcttcaaataactttgtgcaaatca
tgtttaaagttattccattcagatgactacgaattggcaatattgcgtcacggccactgt
ccgttctgtagaagttcacagttacctagagcagaacaaattacaagacacgcaacgtga
DBGET
integrated database retrieval system
