Neodiprion lecontei (redheaded pine sawfly): 107222633
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Entry
107222633 CDS
T09006
Name
(RefSeq) TNF receptor-associated factor 6 isoform X2
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04013
MAPK signaling pathway - fly
nlo04120
Ubiquitin mediated proteolysis
nlo04140
Autophagy - animal
nlo04144
Endocytosis
nlo04214
Apoptosis - fly
nlo04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107222633
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
107222633
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107222633
04140 Autophagy - animal
107222633
09143 Cell growth and death
04214 Apoptosis - fly
107222633
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107222633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107222633
04121 Ubiquitin system [BR:
nlo04121
]
107222633
Enzymes [BR:
nlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107222633
Membrane trafficking [BR:
nlo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107222633
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107222633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
U-box
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Sina_ZnF
zf-rbx1
zf-RING_6
zf-Nse
zf-TRAF
Prok-RING_4
UBZ_FAAP20
Rabaptin
zf-ANAPC11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
107222633
NCBI-ProteinID:
XP_015517555
UniProt:
A0A6J0BSU6
LinkDB
All DBs
Position
6:complement(2946695..2950150)
Genome browser
AA seq
406 aa
AA seq
DB search
MASFNDLNKHCKDAERNVANTENNKADLESRFECPICLTWLRDPVLTSCGHKFCAQCINM
WLRKKGTCCPVDSQPLQPESDLFPDLFTRREISQQRAHCPYQKFGCAIELSPIDIDSHMN
KCDFRRQVGEHVSCPFKSIGCSDIIISEEELKTHLEHSTSSHLTLVAKVIPKLTSLEQTG
SSTRAMEYKWWDPPPKKNLLSTQDEPCPDWQELVKTLYERIVVLEQQNRELTISLSNQQN
HLSSIRTSVRYNDEEMILRYCNGLYIWKLDSFREKLEIMITDSLKMFYSPGFYTSPNGYK
ICARINVSSKDPRYLSLLIHMMHSENDDALDWPFNGSISFVLVHPVDSERNIRDTTFSKP
ELEAFKKPTCELNKRSFGYTEFVLIKDLVEFLREDSMIMRVEVKPI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatttaatgatctaaacaagcattgtaaggacgccgaacgaaatgttgctaat
acggaaaataacaaagcggatttagaatctcgatttgaatgtcctatttgcctgacctgg
ttacgcgacccagtactaacttcatgtggtcataagttttgtgcccaatgcattaatatg
tggctgcggaaaaaaggtacgtgctgtcctgtggatagtcaaccgttacagccggagagt
gatttattcccagatctcttcacacgacgagaaatatcccaacaacgagcacattgtccc
taccaaaaatttggatgtgccatcgaattatcgcccattgacatagacagtcatatgaat
aaatgtgactttagaagacaagttggtgaacatgtttcatgcccatttaaatccattgga
tgctctgatattattatttcggaagaagaactgaaaacgcatttggaacattcaacaagt
tcacatctcactttagtggcgaaggtcattccaaaattaacctccttggaacaaactggt
tcaagtaccagagccatggaatacaaatggtgggacccacccccaaaaaaaaatttgctc
tcaacccaagatgagccatgtccagattggcaggaattagtcaaaacactctacgagagg
atcgtagtcttggagcagcagaaccgtgagctcaccataagtctttctaatcagcaaaat
catctatcttccatccggacttcagtacgatataatgacgaagagatgattctgcgctat
tgcaacggtctttatatttggaagcttgactcgtttagagagaaacttgagatcatgata
actgattctctaaaaatgttttacagtcctggattctatacatctcctaatggttacaaa
atttgtgctaggataaatgtatcttctaaagatcctcgctacttgtctctcttaattcac
atgatgcattcggaaaatgatgatgcattagactggccgtttaatgggtcgattagtttt
gtactagttcatcccgtggattccgaacgtaatatacgagatactacattctccaaacct
gaactagaggcatttaaaaaaccgacttgtgaattgaacaagcgaagtttcgggtatacg
gaatttgttttaatcaaggatttagttgaatttttacgagaagacagtatgattatgaga
gtggaagttaaaccaatttag
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