Nilaparvata lugens (brown planthopper): 111051366
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Entry
111051366 CDS
T07276
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111051366
09123 Folding, sorting and degradation
03018 RNA degradation
111051366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111051366
03041 Spliceosome [BR:
nlu03041
]
111051366
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111051366
mRNA degradation factors
5'-3' decay
Lsm complex
111051366
Spliceosome [BR:
nlu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111051366
Complex C
U2 snRNP components
111051366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
DUF150_C
vATP-synt_E
HydF_dimer
Motif
Other DBs
NCBI-GeneID:
111051366
NCBI-ProteinID:
XP_022193565
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Position
1:complement(83311588..83316199)
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AA seq
102 aa
AA seq
DB search
MAEEGDLIPAITVKEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGDAEETV
TTVEIDEETYEEVYKSTKRNIPMLFVRGDGVILVSPPVRAAS
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaaggtgatttgattccagcaataactgtcaaggaacctttagatttgatc
aggctgagtcttgatgaaaggatctatgtcaagatgagaaacgaaagggaactaagagga
aggcttcatgcctacgatcagcatttgaacatggtactgggtgacgccgaagaaacagtt
actacggttgaaatagatgaagaaacctatgaagaagtttacaaatcaactaagagaaat
attccgatgttgtttgtgcgcggagacggtgtgatcttagtttctccccctgttcgtgca
gcatcatag
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