Nilaparvata lugens (brown planthopper): 111058407
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Entry
111058407 CDS
T07276
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111058407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlu03041
]
111058407
Spliceosome [BR:
nlu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111058407
Complex C
U5 SnRNP specific factors
111058407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
111058407
NCBI-ProteinID:
XP_039301519
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All DBs
Position
1:complement(83533166..83554142)
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AA seq
987 aa
AA seq
DB search
MDADLYDEFGNYIGPELESDEEEEEDVPDRDHDMQDYDDEGGDDAMVMGGVGGMDDGGEG
GGGGMATTAVVLHEDKRYYPAALEVFGPDVETIVQEEDAQPLTVPLVAPVKKTRFQINEQ
ALPKTTYNVEYLADMMDTPDLVRNVALVGHLHHGKTTLADCLVRHTHPGLIDAAEERNLR
YTDSLFTEQERGVSIKATPLTLLLNDVKGKSHLINIFDTPGHVNFSDEVTAAMRMCDGVV
IFVDAAEGVMLNTERLIKHAVQEKLAITVCVNKIDRLMLELKLPPQDAYYKIRHIIDEIN
GLLSLYSDEETTKFVSPILGNVCFASPQYAVCFTLRSFANLYANTYPDVQINEFARRLWG
DIYFNSKTRRFSKKPAHGSAQRSFVEFVLEPLYKLFAQVVGDVDSTLPAVLDELGVRLSK
DEAKINIRPLLRLVCGRFLDDFSGFVDMCVHHIPSPVNNARTKVEHIYTGPTDTQLAEDM
INCDPDGRLMVHSTKMYPTDDCTFFQVCGRVMSGTLHASQEVRVLGENYTLADEEDSRIL
TVGRLWIYEARYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLITNEDIYIFRPLKFNTQ
SVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCVMHDLR
KMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKRNKITMIAEPLEKGLAEDIENQVV
HISWNKKRLGEFFQTKYDWDLLAARSIWAFGPDTAGPNILVDDTLPSEVDKSLLGSVKDS
IVQGFQWGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQMIPTARRVAYSAFLMATP
RLMEPYLFVETQAPADCVSAVYTVLAKRRGHVTQDTPVPGSPLYTIKAFIPAVDSFGFET
DLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSE
DVSINKFFDDPMLLELARQDVMLNYPL
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtatgatgagtttggtaactacataggtccggaattggaatctgac
gaggaagaagaagaggatgttccagaccgcgatcatgatatgcaagattatgatgatgag
ggtggagacgacgccatggtgatgggcggagtggggggcatggacgatggcggggagggt
ggtggagggggaatggcgacgacagcagtggtgctgcatgaggacaagcgctactacccg
gccgccctggaggtgttcggccccgatgtggagaccatagtgcaggaagaggatgcccag
ccgctcactgtgccactggtcgcccctgtcaagaagacgcggttccagatcaacgaacag
gcgctgccgaaaacgacttacaacgtggagtacctggcggacatgatggacacgccggac
ctagtacggaacgtagccctggtgggccacctccaccacggcaagacgacgctggccgac
tgcctggtccgccacacgcaccccggactcatcgacgccgccgaggagcgcaacctccgc
tacaccgactccctcttcaccgaacaggagcgcggtgtcagcatcaaggccaccccgctc
accctcctgctcaacgatgtcaagggcaaatcgcatctcatcaacattttcgacacgcct
gggcatgtgaatttctcggatgaggtgacagcagcaatgcgcatgtgcgatggtgtcgtc
atattcgtggatgccgctgagggtgtcatgctcaacaccgaacgtctcatcaaacacgct
gttcaggaaaaactagcgatcacagtatgtgtgaataagattgataggctgatgctggaa
ctgaagctgcctccacaagatgcttactacaaaattcgacacatcatcgatgaaatcaac
ggtcttttgagcttatactcggatgaagaaacgacgaagtttgtgtcgcccatcttgggc
aacgtgtgtttcgcctcgcctcagtatgcggtctgcttcacgctgcgttcattcgccaac
ctctatgccaacacctatcctgacgtgcaaatcaacgaattcgcccgccgactctggggt
gacatctactttaacagcaaaacgagacgcttcagcaagaagccagctcacggcagcgcg
caacgcagcttcgtggagtttgtgctagagccgctgtacaagctgttcgcccaggtggtg
ggtgacgtcgactccaccctccccgccgtcctcgacgagctgggtgtgcgtctctccaag
gacgaggccaagatcaacatacgtccgctgctgcgactcgtctgcggacgctttctcgac
gacttcagcggatttgttgacatgtgcgttcaccacattccctcgcctgtcaacaatgcc
agaactaaggttgaacacatttataccggaccaactgatactcagctagctgaagacatg
atcaattgcgacccagatggtcggctgatggtgcacagcaccaagatgtacccgacggac
gactgcacgttcttccaggtgtgcggccgcgtgatgagtggcacactgcacgcctcgcag
gaggtgcgtgtgctcggagaaaactacacgctagctgacgaggaggactcacgcatactc
actgtcggccggctctggatctacgaggcacgatacaaaatagaggtaaaccgagtgccg
gctggcaattgggtgctgatcgaaggaatcgaccaacccattgtcaaaacctcaaccatc
acggatctcatcacaaacgaagacatctacatattcaggccgctcaagttcaatacgcaa
tctgtcatcaaaattgctgtggagccagtgaacccgagcgaactgccgaagatgttggac
ggtctgcgaaaggtgaacaagtcctatccactgctggggacacgtgtcgaggagtcgggc
gaacacgtggttctcggcaccggagagctctacctcgactgtgtcatgcatgacctgcgc
aagatgtactccgaaattgacatcaaagtagcggaccctgtggtttcattttgtgaaaca
gtggttgaaacttcatcattgaaatgtttcgcagaaacaccaaacaagaggaataaaatc
acaatgattgctgagccattagaaaaaggtcttgcagaggatattgaaaaccaagttgta
catatttcttggaacaagaaacgattgggagagtttttccaaacgaaatatgactgggat
ttgttggctgctcgttcgatttgggctttcggaccagacacagccggacccaacatcttg
gttgacgacaccctgccttctgaagtcgacaaatcattgcttggatccgtcaaagattca
attgttcagggattccagtggggaactagagaaggaccgttatgtgaagagccaatccga
aatgtcaagttcaagattctagatgccgtgattgctcaagagcctctacataggggtgga
ggtcaaatgatcccgacggcgcgccgcgtggcgtactcagcgttcctgatggcgacgccg
cggctgatggagccctacctgtttgtggagacgcaggcgccggccgactgcgtgtcagct
gtctacacggtgctggccaagcggcgcggtcacgtgacccaggacacacccgtgcccggc
tcgccgctctacaccatcaaggccttcatccccgccgtcgactcgttcggcttcgaaact
gatctgcgcacgcacacccagggccaggccttctgtctgtccgtcttccatcactggcag
attgtgccgggtgatcccctggataagagtatagtgatcagacccctggagccgcagccc
gccacccacttggcgcgtgaattcatgatcaagacgcggcgccgcaaaggcctcagcgaa
gatgtctccatcaacaagttcttcgacgatcctatgttgttggagttggccagacaagat
gtcatgcttaactatccgctctaa
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