Nocardioides marmotae: HPC71_10490
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Entry
HPC71_10490 CDS
T09088
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar00270
Cysteine and methionine metabolism
nmar00450
Selenocompound metabolism
nmar00670
One carbon pool by folate
nmar01100
Metabolic pathways
nmar01110
Biosynthesis of secondary metabolites
nmar01230
Biosynthesis of amino acids
nmar04980
Cobalamin transport and metabolism
Module
nmar_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HPC71_10490 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HPC71_10490 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPC71_10490 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
HPC71_10490 (metH)
Enzymes [BR:
nmar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HPC71_10490 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QKE03493
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All DBs
Position
2162919..2166599
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AA seq
1226 aa
AA seq
DB search
MLRERVMVIDGAMGTAIQRDRPDEAGYRGERFADWPSDVVGNNDLLTLTQPAIIEAIHRE
YLEAGADIIETNTFNANAVSLADYGMEELAYELNLAAAQLARSACDAVETPDRPRYVAGA
LGPTTRTASISPDVNDPAARNVTYDQLVAAYRTAAQGLVDGGADLIVIETIFDTLNAKAA
IFAVETLFEEQGRRWPVIISGTITDASGRTLSGQTTEAFWNSVRHARPLAVGLNCALGAK
EMRPYIAEMSRVADTFVSCYPNAGLPNAFGEYDEAAEETAAVVREFAEAGFVNLVGGCCG
TTPAHIGAIADAVADATPREVPELRPALRLSGLEPFTIDADSLFVNVGERTNITGSARFR
TLIKDGDYDTALSVAGQQVENGAQVIDVNMDEGMIDGVAAMDRFLKLIASEPDISRVPVM
VDSSKFEVIEAGLKNVQGKPIVNSISLKEGEDAFRAHARLCRKYGAAAVVMAFDEDGQAD
NLDRRKAICERAYRILVDEVGFPAEDIIFDPNVFAVATGIEEHASYGLDFIEATRWIKEN
LPGAKVSGGISNVSFSFRGNNPVREAIHAVFLFHAIAAGLDMGIVNAGALVVYDQVEPEL
RERIEDVVLNRRPDAAERLLEVAESFNRKGEEVEATAEEWRSLPVGERITHALVKGIDAH
VEADTEELRQEIAERGGRPIEVIEGPLMSGMDVVGDLFGSGKMFLPQVVKSARVMKKAVA
YLIPYIEQEKLDNPALATAKDTNGTIVMATVKGDVHDIGKNIVGVVLQCNNFEVIDLGVM
VPAQKILDTAREVGADVIGLSGLITPSLDEMVTVATEMQRLGLEIPLLIGGATTSRAHTA
VKVDPRYDAPVVWVKDASRSVPTVASLLHAERRVPLLEAVKADYDALRARHATKQDRPQL
AYADACANATPIDWEGYLPPAPQQPGVHVLDDYDIAELREYIDWQPFFNAWEMKGKFPDI
LNSPTSGEAARKLYDDAQAMLDRIVEERWLTARAVYGFFPAGSEGDDVVVWSDGDRRERR
TVLHQLRQQGQHREGVPNRSLADYVAPVDSGLPDHVGAFAVTAGIGLPERVQQFKDDLDD
YSAIMIEALADRLAEAFAERLHQRVRTELWGYEPAESLSNEDLIAERYTGIRPAPGYPAC
PDHTEKQTIWELLDVEASTGIRLTESMAMWPGASVSGLYYSHPQSQYFVVGRLGRDQVAA
YAERKGWTLAEAERWLSPNLGYDPED
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggagcgggtgatggtcatcgacggcgccatgggcaccgccatccagcgcgac
cggcccgacgaggccggctatcgcggcgagcgcttcgcggactggcccagcgacgtcgtc
ggcaacaacgacctgctgacgctcacccaaccggccatcatcgaggccatccaccgcgag
tacctcgaggccggcgcggacatcatcgagaccaacaccttcaacgccaacgcggtctcg
ctggccgactacggcatggaggagctcgcctacgagctcaacctggccgccgcgcagctg
gcccgcagcgcctgcgacgccgtggagacccccgaccggccgcggtacgtcgccggcgcc
ctcggcccgaccacgcgcaccgcgtcgatctcgcccgacgtcaacgaccccgctgcccgc
aacgtgacctacgaccagctcgtggcggcgtaccgcaccgccgcgcagggcctggtcgac
ggcggggccgacctcatcgtcatcgagacgatcttcgacaccctcaacgccaaggccgcg
atcttcgccgtcgagacgctcttcgaggagcagggccgccgctggccggtcatcatctcc
ggcaccatcaccgacgcgtcgggccgcacgctctcgggccagaccaccgaggcgttctgg
aactccgtgcgccacgcccgcccgctggccgtcggcctcaactgcgcgctgggcgccaag
gagatgcgcccctacatcgccgagatgagccgcgtcgccgacaccttcgtcagctgctac
cccaacgccggcctgcccaacgccttcggtgagtacgacgaggccgccgaggagaccgca
gcggtggtccgggagttcgccgaggccgggttcgtcaacctggtcggcggctgctgcggc
accacgccggcccacatcggcgccatcgccgacgcggtcgccgacgccaccccgcgcgag
gtgcccgagctccggccggccctgcgcctctcgggcctggagcccttcaccatcgacgcg
gactcgctgttcgtcaacgtcggcgagcgcacgaacatcaccggctcggcccgtttccgc
acgctgatcaaggacggcgactacgacaccgccctctcggtcgcgggccagcaggtcgag
aacggcgcgcaggtcatcgacgtcaacatggacgaggggatgatcgacggggtcgcggcg
atggaccgcttcctcaagctgatcgcaagcgagcccgacatcagccgggtcccggtcatg
gtcgactcctcgaagttcgaggtgatcgaggccgggctgaagaacgtccagggcaagccg
atcgtgaactcgatctcgctcaaggaaggcgaggacgccttccgcgcgcacgcccggctg
tgccggaagtacggcgccgccgcggtcgtcatggccttcgacgaggacggccaggccgac
aacctcgaccgccgcaaggcgatctgcgagcgggcctaccggatcctcgtcgacgaggtg
ggcttcccggccgaggacatcatcttcgaccccaacgtcttcgcggtcgccacgggcatc
gaggagcacgcgtcgtacggcctggacttcatcgaggcgacccgctggatcaaggagaac
ctccccggggcgaaggtctcgggcggcatctccaacgtcagcttctccttccgcggcaac
aacccggtgcgcgaggcgatccacgccgtcttcctcttccacgccatcgctgccggcctc
gacatgggcatcgtcaacgccggcgcgctggtggtctacgaccaggtcgagcccgagctg
cgcgagcggatcgaggacgtcgtgctcaaccggcgccccgacgccgccgagcggctcctc
gaggtcgcggagtcgttcaacaggaagggcgaggaggtcgaggccacggccgaggagtgg
cgctcgctgcccgtcggcgagcggatcacccacgccctggtcaagggcatcgacgcccac
gtcgaggccgacaccgaggagctgcgccaggagatcgccgagcgcggcggccgcccgatc
gaggtgatcgagggcccgctgatgtccgggatggacgtcgtcggcgacctgttcggctcc
gggaagatgttcctgccccaggtcgtgaagtccgcgcgcgtgatgaagaaggccgtggcc
tacctcatcccgtacatcgagcaggagaagctcgacaaccccgcgctggcgaccgccaag
gacaccaacggcacgatcgtcatggcgacggtcaagggcgacgtccacgacatcggcaag
aacatcgtcggcgtggtcctgcagtgcaacaacttcgaggtcatcgacctcggcgtcatg
gtgccggcccagaagatcctcgacaccgcccgcgaggtcggcgccgacgtcatcggcctg
tccggcctgatcaccccgtcgctggacgagatggtgacggtcgcgaccgagatgcagcgc
ctgggcctggagatcccgctgctgatcggcggcgcgacgacctcccgggcgcacaccgcg
gtcaaggtcgacccccgctacgacgcccccgtcgtctgggtcaaggacgcctcccgctcg
gtgccgacggtggcctcgctgctccacgccgagcggcgggtgcccctgctggaggcggtc
aaggccgactacgacgcgttgcgcgcccggcatgccaccaagcaggaccggccccagctc
gcctacgccgacgcctgcgcgaacgccacgccgatcgactgggagggctacctcccgccg
gcgccgcagcagcccggcgtgcacgtgctcgacgactacgacatcgccgagctgcgcgag
tacatcgactggcagccgttcttcaacgcctgggagatgaaggggaagttccccgacatc
ctcaacagccccacctccggggaggccgcccgcaagctgtacgacgacgcgcaggccatg
ctcgaccggatcgtcgaggagcgctggctgaccgcccgcgccgtctacggcttcttcccc
gccggctccgagggcgacgacgtcgtcgtctggtccgacggggaccgccgcgagcggcgc
accgtcctccaccagctgcgccagcagggccagcaccgcgagggcgtgcccaaccgctcg
ctcgcggactacgtcgcccccgtcgactccggcctgcccgaccacgtcggcgcgttcgcg
gtcaccgccgggatcggcctgcccgagcgggtccagcagttcaaggacgacctcgacgac
tactccgcgatcatgatcgaggcgttggccgaccggctcgccgaggccttcgccgagcgg
ctgcaccagcgcgtccgcaccgagctgtggggctacgagccggccgagtcgctgtccaac
gaggacctcatcgccgagcgctacaccggcatccggccggcgccgggctaccccgcctgc
cccgaccacaccgagaagcagacgatctgggagctcctcgacgtcgaggcgagcaccggg
atccggctgaccgagtcgatggcgatgtggccgggcgcctcggtctccgggctctactac
agccacccccagtcgcagtacttcgtcgtcggccggctcggccgcgaccaggtggcggcg
tacgccgagcgcaaggggtggacgctcgcggaggccgagcgctggctctccccgaacctc
ggctacgacccggaggactga
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