Neisseria meningitidis FAM18 (serogroup C): NMC0614
Help
Entry
NMC0614 CDS
T00458
Symbol
ligA
Name
(GenBank) putative DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmc
Neisseria meningitidis FAM18 (serogroup C)
Pathway
nmc03030
DNA replication
nmc03410
Base excision repair
nmc03420
Nucleotide excision repair
nmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMC0614 (ligA)
03410 Base excision repair
NMC0614 (ligA)
03420 Nucleotide excision repair
NMC0614 (ligA)
03430 Mismatch repair
NMC0614 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmc03032
]
NMC0614 (ligA)
03400 DNA repair and recombination proteins [BR:
nmc03400
]
NMC0614 (ligA)
Enzymes [BR:
nmc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMC0614 (ligA)
DNA replication proteins [BR:
nmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMC0614 (ligA)
DNA repair and recombination proteins [BR:
nmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMC0614 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMC0614 (ligA)
MMR (mismatch excision repair)
DNA ligase
NMC0614 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMC0614 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAM09908
UniProt:
A1KSS7
LinkDB
All DBs
Position
complement(637368..639893)
Genome browser
AA seq
841 aa
AA seq
DB search
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKL
FRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHA
EMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIK
TVSNIPLRLHGENTPELIEVRGEVLMLKADFVALNKRQAENGQKPFANPRNAAAGSLRQL
DSRITAQRKLHFFPYSVARQQDGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAF
YEHMQQKRPELPYEIDGMVVKVNSLAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDV
QIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVR
VIFERRPMRETAVAVSDGIGHRQDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIER
EEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL
DIPTLQKMKETADKTVAESDQMPSEGSSVGASGKHKKQPVKWAENILAGIEASKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQ
AMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPGFKISENKAQALWELAGKNIEGLQ
TDKALPTDWQAWRSEPQNAALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTL
PTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLL
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactcaaaacataacactaactttaccaatcttcttaaaccgtctgatagt
gatataaaacaatttgccgcacaacacatccgccacctcaccgacctgctcaaccgctat
gcctacgaatactacaccctcgacgcgcccagcgtacccgatgccgaatacgacaaatta
ttccgcgagctcgaagcgttggaattaaaccatcccgagctcaaactgcccgacagtccg
acccagcgcgtcggcggcgagcctttggcgggatttgccgaagtgcgccacgaagtgccg
atgctgtcgctgaccaacgctttttccccgcaagatgaaaacggcgtgttcgaccatgcc
gaaatgtacgctttcgaccaacgcgtgcgcgacggtttggacggcggcaaacccgaatac
gttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattg
gtgcaggcggcaacgcgcggcgacggcacgacgggcgaagacgttacccaaaacatcaaa
accgtatccaacatccccttgcggctgcacggcgaaaatacgcccgaactcatcgaggta
cgcggcgaagtgctgatgctcaaagccgattttgtcgccctcaataaaagacaagccgaa
aacgggcaaaaaccctttgccaatccgcgcaacgccgccgccggcagcctacgccaactc
gattcgcgcatcaccgcgcaacgcaaactgcactttttcccctactccgtcgcccgccag
caagatggtttcgtcgcggaagaacacatccaggaactcgcctatttccaagcactcggc
ttcagtctgcccaatggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttt
tacgaacacatgcagcaaaaacgccccgaactgccctacgaaatcgacggcatggtggtt
aaagtcaacagcttggcgcaacagcacgaactcggcttcatctcccgcgcgccgcgttgg
gcggttgcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtg
caaatcggcaggacgggcgcggtaacgccggttgcccgattacagcccgtattcgtcggt
ggcgtaactgttaccaacgccaccctgcacaatcaggacgaagtatcgcgcaaagacgtt
cgcgtcggcgataccgtcgtcgtacgccgtgccggagacgtgattcccgaagttgtgcgc
gtgatttttgaacgccgcccgatgcgggaaaccgccgttgccgtttcagacggcatcggg
catcggcaggacgatttgtttgccgaaacaccgtccgccaatcaaacccaatccgttccg
ctccacaagccctaccgcctgccgacccactgccccatctgccgcagcgaaatcgaacgc
gaagaaggcgaagccgtcgcccgatgcagcggcggtatgctttgtcaggcacaacgcgcg
caaggcttaatccacttcgcctcgcgcaaagcgatggacatcgacggcttgggtgaaaaa
caaatcgaacagcttgtcgcgcaagacctcgtccgccacttcgccgatctctaccgcctc
gacatcccgaccttgcaaaaaatgaaggaaacagcggacaaaaccgttgccgaatcggat
caaatgccgtctgaaggcagttcggtcggcgcgtcgggcaaacataaaaaacaaccagtc
aagtgggcggaaaacatcctcgcaggcatagaagccagcaaaacgcccgaactcgcccgc
ttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctggcacag
gcattcggcacattggaacgcgtccgccgcgcccccgaacccgtcctcgcctgcctgccc
gacatcggtacggtagtggcgcgttccattgcccacttcttcgcccaagccgaacagcag
gcgatgatagacgaactgctcgccgcaggcgttgccccgcaaacccaagccgttaccatc
ccgcccgcccgccacgccgaaccgcaacgctggatcgcccgcctgcccggtttcaaaatc
agcgaaaacaaagcccaagccttatgggaactcgccggcaaaaacatagaagggctgcaa
accgacaaagccctccccaccgactggcaggcgtggcgcagcgaaccacaaaacgccgcc
ctgctcgaaaacctgaaaaccttcttcgcgcaaatgccgtctgaagacgaggcggcgcaa
ggttcagacggcatcaataaagccgtggcgggcaaaaccttcgtgttaaccggcaccctg
cccaccctcaaacgcgaccaagcccaatccctaatcgaagccgcaggcggcaaagtttcc
ggcagcgtgtccaaaaaaaccgattacgtcgtcgccggagaagccgcgggcagcaagctg
gaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttaccctgctc
ggctga
DBGET
integrated database retrieval system
