Numida meleagris (helmeted guineafowl): 110388719
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Entry
110388719 CDS
T06015
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03440
Homologous recombination
nmel03460
Fanconi anemia pathway
nmel04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110388719 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
110388719 (BRCA1)
03460 Fanconi anemia pathway
110388719 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nmel01009
]
110388719 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmel04121
]
110388719 (BRCA1)
03036 Chromosome and associated proteins [BR:
nmel03036
]
110388719 (BRCA1)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110388719 (BRCA1)
Enzymes [BR:
nmel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110388719 (BRCA1)
Protein phosphatases and associated proteins [BR:
nmel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110388719 (BRCA1)
Ubiquitin system [BR:
nmel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110388719 (BRCA1)
Multi subunit type E3
BRCC complex
110388719 (BRCA1)
Chromosome and associated proteins [BR:
nmel03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110388719 (BRCA1)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110388719 (BRCA1)
BRCA1-A complex
110388719 (BRCA1)
BRCA1-B complex
110388719 (BRCA1)
BRCA1-C complex
110388719 (BRCA1)
BRCA complex
110388719 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
110388719 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
BRCT_2
RING_XB3-XBAT31
zf-Nse
zf-RING_6
zf-RING_5
zf-MIZ
zf-RING_10
TRAF3_RING
zf-ANAPC11
RTT107_BRCT_5
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
110388719
NCBI-ProteinID:
XP_021233927
LinkDB
All DBs
Position
26:complement(4700237..4721487)
Genome browser
AA seq
1773 aa
AA seq
DB search
MDLSVIAIGDVQNVLSAMQKNLECPICLDVIKEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLVEGLLEAISAFELDTGIKFLSNHRFLKTSTEAATAEL
LCNNSSVIQSKGFRNRKRSAKENGQDNYTLQEANVDPQLIDNRVKGCSLRSKKQKCGIEK
GVLIDLGTDSSEELFILASNTGLFFSFINLPNRLEDKEELEEPKSAEKNENCCNTQPLKL
GAKEIILPNIVGETDFLKEALSKKSMLNITEHVKSNRVNTIEGQSSPLNIFDADLLTGQC
DGIGNASPLKNDDTSFSKNAEEIDAEETQCTNKNQQLDLKDNSESRLDKTEEKAICVPSV
EDVEIYERVNDPLPEKEPPLEKLLQPKVPHCPTVHEVSRKRLKESIQKVNEWFSKSNEIL
SSSSSQNDSAETTDASGEGEISLSDKDSFVSEKTNSIVDSVEVTVVEGNKRWPKQTTYSI
KDKIFGKTYERERKSNPSAILRKILPATKKEDVAAEEDCLNNSGKDRLKRKRKPARVLQP
EDFIKKKGLEEADRCPQGINSSRGDGEKKKCDGNSAVKGNPLLEDRKGSMLAEFKEGGLQ
WKNGSEKVAGKHSDGQLELNNSDQKSTKNTSSAAKGCRRSTRSRSSINLVVDRNPCSFDP
AEPLISSYPSSEEPSQVDCEQRQVRRSRRLQLLSEEITKETGKMRVIKEARNSDSGPEGS
VLGVERNMLFPSSQCKDLRKQRNVLSYVSLGDLNGADLEANEIGISPKNSSDSAKKRSLF
NPLSSCQHSNFNSPSPKAGSQEGKMLGSLFVLQSPSKTVVHSASNLTEEKGTGSCATFPQ
DKEYCSQNVPEDFRTEKSPMAKNVSELTVEAEDSELDMQYLRNIFRNSKRQSFSLYPAPM
KACTTDDTASEKLNTSPPDRVEKRQTTYLRTENLQDGKTTTEYLSSACEKFKTCESACVS
PVSCFVSNVECLHTVEHQEDVSEAANHGNLMTPVRMCADRNEGRNRPPKGGKGCEKTLSS
DIGVESKLRQNPVRSTRSQSDQSNTEERAFQGTDLNIVNETYFSSESNQVEKAEVVGGKG
PMQHFKSSPMVCPTACQQNPAEFNCKVTEKKSSKRERRLVKGNEERVIQTVSTGLSERLV
GEALEESLKGHSNSTDLSETPDGLLCSDNDTEGSASCCLTNSKDTSAVFVKRSGAALVKE
VNDTIVSCKPRSEGIQRSRRRAQKLQSSDEESSEDEDLPCFQELVFGKSVGTPLQIKKQV
VPVVRSSANPSVLPHSECLNENNKQETLEAALSNECVSPSQESECSVNLFSSQSNMSEES
VDGAQEPKKTLTQVSNVNKSNEALQSCSGGLKRRKNNPKDEYQEDPNMGANLGEASGYDS
ETSHVEESREPSSQGEILSTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQGAEVLPVCKE
LPYSSCGMELGMEQMRQQTEDMSEHDSGTKLSKASVLPALCGNVTRSPNSSSSPVKHPCL
QTAEGTSSSAVAQSDNKSNVQVCKSKRSVFFPTSVLHGAAGKENAASSGTTYRTEMSIVA
SGLNQSEHLMVQKFARKTQSAFSNHVTDGTTHVIMKTDKELVCERTLKYFLGIAGRKWVV
SYQWVIQSFKEGRILDEENFEVKGDVINGRNHQGPKRARQSLSEKIFKDFEICCYGPFTD
MTTGHLEWIVELCGASVVKQLHLFTHKVNSTAVVVVQPDAWMEGTSYEGKTTYCHELFHA
IQRKNNVAVVTREWVLDSVACFECQELDAYLVS
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcagtgattgccattggagatgtgcaaaatgtgctttcggccatgcagaag
aacttggagtgtccaatctgtttggatgtgataaaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgtatgtttaagctcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgtaagactgaagttaccaagagaagtctcaaagaaaattccagattt
aagcagctagttgaaggattgttggaagctatcagtgcatttgagcttgacactggaata
aaatttttaagcaatcatcgttttcttaaaacatccacggaagctgctactgctgagctc
ctgtgtaataacagttctgtcatccagagtaagggtttcagaaacaggaagagaagtgct
aaagaaaatggacaagacaactataccttgcaggaagctaatgtggatccacagcttata
gataacagggtcaaagggtgttccctaagaagcaaaaaacagaaatgtggcattgaaaaa
ggtgtacttatagatcttggcactgattcatctgaagagctttttatactggcaagcaat
actggactatttttttccttcataaaccttcccaacaggctagaagacaaagaagagcta
gaagaaccaaagagtgctgagaagaatgaaaattgttgcaatacccagcccctcaagctg
ggtgctaaagaaataattctaccaaatatcgtaggtgaaactgatttcttgaaggaggct
ttgagcaagaaaagcatgctgaacatcactgaacatgtcaaatctaaccgagtaaataca
attgaggggcagagttctcctttaaatatttttgatgcagacctacttacagggcagtgt
gatgggataggtaatgccagtcccttaaagaatgatgacacatctttctccaagaatgca
gaagaaatagatgcagaggaaactcagtgcactaataaaaaccaacagcttgacttaaaa
gataactcagaaagtagactggataaaactgaagagaaggctatttgtgtgccgagtgtg
gaagatgtagaaatatacgaacgcgtgaatgatcctttgcctgaaaaagaacctcctctg
gagaaactacttcagcctaaggtacctcactgtcctactgtgcatgaggtctctaggaag
agactgaaggaaagcattcagaaagtcaatgaatggttttcaaaaagcaatgagattctg
tcttccagttcatcccagaatgattctgctgaaacaactgatgcttcaggtgaaggagaa
atttctttatcagataaagattcatttgtttcagagaagaccaactctatagtagattct
gtggaagttacagtggttgaaggaaacaagagatggccaaagcaaacaacatatagcatc
aaagacaaaatatttgggaaaacatacgagagagagaggaagtcaaatccctctgctatc
ttgagaaagattttgcctgctacaaaaaaggaagatgtggctgctgaagaggactgcttg
aataattctggaaaagacagactaaaacgaaaaaggaagcctgcccgtgtccttcagcct
gaagacttcatcaagaagaaaggtctagaagaggcagatagatgccctcagggtattaac
tccagccgcggagatggtgagaagaaaaaatgtgacggaaattctgctgttaaggggaat
cccctccttgaagacagaaagggtagtatgctagcagaattcaaggaaggaggattacag
tggaaaaatggaagtgaaaaggtggcaggcaagcactctgatggacaactggaactaaat
aactctgatcagaagagcactaagaatacaagttctgcagcaaaaggatgcaggcgttca
actagaagcagaagttctataaacttagtagttgatagaaacccgtgttcctttgatcca
gctgagccactgatcagtagctatccaagcagtgaagaaccaagccaagttgattgtgag
caaagacaagtcagacgcagcaggaggcttcagctactttctgaagaaattacaaaagaa
acaggaaaaatgagagtaattaaggaagcaagaaattctgacagtggcccagaagggtct
gtccttggagttgaaaggaacatgttatttcccagttcccagtgcaaagacctgaggaag
cagcggaatgtattgagttacgtatcactcggtgatctgaatggtgctgatctggaagca
aatgaaatagggattagtccaaagaattcatctgatagtgcaaaaaaaagaagtctcttc
aatcccttatcttcttgtcagcattcaaattttaattccccttcacccaaagcaggttct
caagaaggtaaaatgctaggtagccttttcgtcctacagtctccttctaagactgttgtg
cactctgcttccaacctgactgaagagaaggggactggatcatgtgctacttttccccag
gacaaagaatactgttcacagaatgttccagaggacttcagaactgaaaagtccccaatg
gctaaaaacgtttcagaattgaccgtggaagctgaagacagtgagttagacatgcagtat
ctgcgaaatatatttcggaattcaaagcggcagtcatttagcctttatcctgctcccatg
aaggcatgtaccacagatgatactgcatctgaaaaattaaatacttcacctcctgatcgg
gtagaaaaaaggcagactacatatttacggacagaaaacttacaagacgggaaaacaact
actgaatatttgagtagtgcttgtgagaagtttaagacctgtgaatctgcttgtgttagt
cctgtgtcgtgctttgtcagcaatgttgaatgtttgcacactgtggagcatcaagaagat
gtttcagaggctgcaaatcatgggaatctgatgacgccggtaagaatgtgcgctgatagg
aatgaaggcagaaacagaccaccaaagggagggaagggatgtgaaaagacattgtcatct
gacataggggtagaaagcaaactgagacagaatccagtcagaagcactagaagtcaaagt
gatcagagcaacacagaagagcgtgctttccaaggaacagatctgaacatagtcaatgaa
acgtacttcagttcagaaagcaatcaagtggaaaaggctgaagttgttggtggcaaagga
ccaatgcaacacttcaagtctagtccaatggtttgtcctacagcttgtcaacaaaatcca
gctgaattcaactgcaaagtcactgaaaagaaaagtagcaaaagagagagaagactggta
aagggcaacgaagagcgagtaatccaaactgtcagcacagggttgtctgagcgtttagtt
ggagaggcactagaagaatctcttaaaggccacagcaattctacagatctgtctgaaacc
cctgatggcttactgtgctctgacaacgatactgaagggagtgccagctgttgcctaact
aatagcaaagacacatctgctgtatttgtaaaaagaagtggtgctgcccttgtgaaagaa
gtaaatgatacaattgttagctgtaagccaagatctgaaggtattcaaaggtctcggaga
agagcccagaaactgcaatcttcagacgaagaatctagcgaggatgaagatttaccatgt
tttcaggaattagtgtttggcaaatcagtaggcacacctttgcagatcaaaaagcaggtg
gtacctgtggtacggtcttcagcaaatcccagcgtgttgcctcacagtgaatgtcttaat
gaaaataacaagcaggaaacacttgaagctgccctaagcaatgagtgtgtttcaccgagc
caggagtcagaatgctctgtgaacttattttcttcccagtccaacatgtctgaagaatca
gttgacggagcacaggagccgaagaagactttaacacaagtgagcaatgtaaataagagt
aacgaagctcttcagagttgcagtggagggctgaagagaagaaaaaataaccccaaagat
gagtaccaagaagatccaaacatgggggcaaacctaggtgaagcatctggatacgacagt
gaaacaagtcatgtagaggagtcacgtgagccatcttctcagggtgaaattctttctaca
cagcagaagaatgctatgcagaataacctaaaaaagttgcaacaagaaatggctgtactt
gaagcagtgctaaagcagcatggaagtcagggcgctgaggtattgcctgtgtgtaaggaa
ctgccatattccagttgtggaatggagcttggaatggagcagatgagacaacaaacggaa
gatatgtctgagcatgactctgggaccaagctaagtaaggcatctgttttaccagctctc
tgtggaaatgtgaccaggagtccaaatagctcttcctcccctgtaaagcatccttgcctt
caaactgcagaaggaacaagtagttccgctgtagctcagagtgataacaaaagcaacgtt
caagtatgtaaatcaaagagaagtgtattttttcctacatctgtactgcatggtgcagct
gggaaagaaaatgctgcaagttcaggtacgacttacaggacagaaatgtcaattgtggcg
tctggtctgaatcaaagtgaacatttgatggtccagaagtttgccagaaaaactcagagc
gctttctctaatcacgttactgatggaacaacccatgtcataatgaaaacagataaggag
ctggtatgtgaacggacattgaagtactttctgggtattgcaggaagaaaatgggtagtt
agttatcagtgggtaattcagtcttttaaagaaggcaggatactggatgaggagaacttt
gaagttaaaggagatgtaatcaatggcagaaaccaccagggtcctaagagggctaggcaa
tctctgagtgaaaagatctttaaagactttgagatctgctgctatggacctttcactgat
atgactacaggacatttagaatggatagtggagctttgtggtgcctctgtagtgaaacaa
cttcatctgttcacccacaaagtaaattccactgctgttgttgttgtgcagccagatgct
tggatggaaggcacaagttatgaaggtaaaactacttattgtcatgaattgtttcatgca
atccagcgaaagaacaatgttgccgtggtgactcgagagtgggtgttagacagtgttgct
tgctttgagtgtcaggagttggatgcttatcttgtgtcctaa
DBGET
integrated database retrieval system
