Numida meleagris (helmeted guineafowl): 110401369 Help Entry 110401369         CDS       T06015                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism nmel  Numida meleagris (helmeted guineafowl) Pathway nmel04115   p53 signaling pathway nmel04145   Phagosome nmel04148   Efferocytosis nmel04350   TGF-beta signaling pathway nmel04510   Focal adhesion nmel04512   ECM-receptor interaction nmel04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nmel00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     110401369 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110401369 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     110401369 (THBS1)    04148 Efferocytosis     110401369 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     110401369 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     110401369 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110401369 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nmel04131]     110401369 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nmel00536]     110401369 (THBS1) Membrane trafficking [BR:nmel04131]  Endocytosis   Phagocytosis    Opsonins     110401369 (THBS1) Glycosaminoglycan binding proteins [BR:nmel00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110401369 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  110401369 NCBI-ProteinID:  XP_021258073 LinkDB All DBs Position 6:complement(30228894..30244693) Genome browser AA seq 1180 aa AA seqDB search MLAMGPAAVLALILLAVNGPEAKRTAESRSDDNSVFDLFELAGFSRKAAGRRAPGVHLVK GPESSSPAYRIEDASRIPAVPDSKFQDLLDIIHAEKGFILLATLRQAKKSRGTLLAVERK DGSGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVEEDRAQLYVG CEKMENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNK GCSSSTSAIITLDNPMNGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMV TTLQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTKCTCQNSATICRK VSCPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLN NRCEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLN GKPCEGEARETKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKT CVGEAKGTQVCNKQDCPVDGCLSNPCFAGTVCTSSPDGSWKCGACPAGYHGDGIHCQDID ECKEVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGSQPFGRSVEDAMANKQVCKPRNPC TDGTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANAT YHCKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDV GDRCDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVG DQCDNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGK GDACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENV DISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSG TFFINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTT GPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKK IMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3543 nt NT seq  +upstreamnt  +downstreamnt atgctcgccatggggccagccgctgttctcgccctcatcctcctggcggtcaacggcccg gaagccaagcgcacggcagagtccaggagtgatgataacagcgtctttgatctctttgaa ctcgctggcttttctcgcaaggcagctgggcgccgggcacctggggtgcacctggtgaag gggccagagtcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtc cctgactccaagttccaagacttgttagatatcatccatgctgagaagggcttcatcctt ctggccactctccggcaagccaagaagagcagaggcacgctgctggctgtggaacggaag gatggctctggtcatgtcttcagtctagtttcaaatggcaaggcaggcaccttggacctg agtctctccggtgatggcaagcagcagttagtgtccgtagaggatgccttgttagctaca ggacattggaagaacatcaccttgtttgtggaagaagaccgggctcagctttatgtgggg tgtgagaaaatggagaatgctgaactggacattcccatccaaaacatcttcaccagagac ctggccagcagtgccaggctccgtattgccaaagggggagtcaatgacaacttccaggga ctgttgcagaatgtgcggttcgtgtttggaacgactctggaaactatcctgaggaacaaa ggctgctccagctccactagtgcaatcattactttggacaaccccatgaatggttccagc ccagctatccgcactaattacattggacataaaacaaaggacattcaagcagtctgtggc ttttcctgtgatgaattaactaacatgtttgtggaactgcaagggctacggtccatggtt acaacacttcaagacagagttcgcaaagtgactgaagaaaatgaactgattgccaaagtg gtccagatcactcctggagtatgcattcataatgggatcttgcacaaaaataaggaagaa tggactattgacagctgcactaaatgtacttgccagaattctgccactatatgccggaaa gtgtcttgtcctctcatgccttgttctaatgccactgtgcctgatggggagtgctgtccc cgatgctggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttca tgttcagtgacatgtgggaatgggattcagcagagagggcgttcctgtgacagtctcaac aaccgctgcgaagggtcttctgtgcagactcggacttgccaccttcaggagtgtgataag agatttaaacaggatggtggctggagccactggtcaccatggtcatcatgttctgtcact tgtggcacgggcatgatcactagaattcgcctctgcaactctccagtaccacagctgaat ggcaagccttgtgagggtgaggcaagagaaactaagccctgccagaaagatccttgccca attaatggcaactggggaccatggtctccatgggatgcttgcacagtgacatgtggagga ggacttcagaaacgcagccgtctctgcaataatcctgagcctcagtacggtgggaagacc tgtgtaggtgaggctaaaggaactcaggtttgcaacaaacaggactgtccagttgatggg tgtctgtctaatccctgctttgcgggaactgtgtgtacaagctcccctgatggttcttgg aagtgtggtgcctgtcctgctggctaccatggtgatggtatccactgccaagatattgat gagtgcaaagaagttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaat actgaacccggatacaactgtctgccttgtccaccacgtttcactgggtcacagccattt ggtcgcagtgttgaggatgccatggcaaacaaacaggtctgcaagccacgtaatccatgc acagatggaacacacgattgcaacaagaatgccaaatgcaactatcttggccacttcagt gacccaatgtatcgttgtgaatgtaaaccaggctatgctggcaatggcataatttgcgga gaagatactgacttggatggatggccaaatgagaaccttgtctgtgttgccaatgccact taccactgtaaaaaagataactgccctaatctccccaactctgggcaggaagactatgat aaagatgggattggtgatgcctgtgataatgacgatgatgacgatggtattcctgatgac cgggacaactgcccattcatctacaacccacagcagtatgactatgacagggatgatgtt ggtgaccgttgcgataactgcccctacaatcacaaccctgatcagactgacactgacaac aatggagaaggagatgcatgtgcagtggacattgatggagatggggtcctcaatgaaagg gacaactgccaatatgtctacaatgtagaccagagggatacagacttggatggtgttgga gatcagtgtgacaactgtccactggaacataatcctgaccaggaagatactgactctgac cgtataggtgatgagtgtgacaacaaccaggacatagatgaagatggtcatcaaaataat cttgataactgcccttatgtgcccaatgccaatcaagctgatcatgacaaggatggaaaa ggtgatgcttgtgaccatgatgatgacaatgatggtattcctgatgacaaagataactgc agattggttgccaacccagatcaagcagattctgatggtgatggacgtggagatgcttgc aaagatgactttgaccaagacagtgtaccagatattgatgacatatgccctgaaaacgtg gacatcagtgagactgacttccgaaggtttcagatgattcccttggatcccaaaggaaca tcccaaaatgatccaaactgggttgtacgtcaccagggtaaagaactggttcagacagtc aactgtgaccctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggc accttctttatcaatacagaaagggatgatgattatgctggctttgtatttggctaccaa tctagcagtcgtttctatgttgtcatgtggaagcagattactcagtcttactgggactcc acaccaaccaaagctcaaggctactcaggtctctccatcaaggttgtgaattccaccaca ggtccaggagaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtg agaactttgtggcatgaccctcgtcacataggctggaaagacttcactgcatacagatgg cgccttagccatagaccaaagactggcttcatcagagttgtaatgtatgaggggaagaaa atcatggccgactcaggaccaatctatgataaaacctatgctgggggtcgtctaggatta tttgtcttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatcca taa

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