Numida meleagris (helmeted guineafowl): 110405265
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Entry
110405265 CDS
T06015
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04010
MAPK signaling pathway
nmel04020
Calcium signaling pathway
nmel04510
Focal adhesion
nmel04540
Gap junction
nmel04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110405265 (PDGFRB)
04020 Calcium signaling pathway
110405265 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110405265 (PDGFRB)
04540 Gap junction
110405265 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110405265 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nmel01001
]
110405265 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nmel04090
]
110405265 (PDGFRB)
Enzymes [BR:
nmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110405265 (PDGFRB)
Protein kinases [BR:
nmel01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
110405265 (PDGFRB)
CD molecules [BR:
nmel04090
]
Proteins
110405265 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
110405265
NCBI-ProteinID:
XP_021266114
LinkDB
All DBs
Position
12:12725805..12751536
Genome browser
AA seq
1090 aa
AA seq
DB search
MLCPSLKASLQLLILTGLLEVTSGGRGLHIEPEDAELVLSLHSTFSLVCHGDRELVWERD
GQPLPALLEQKDKVFISNLTLRNVTGRHTGEYACSYSPDQAPERAERKALYIYVPDPSLV
FLPAINSEEFFIFITGYTEAIIPCRVTNPELQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYYCQAIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHDIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
IMVQVIERGFVRFHTHLNSTVYAEVHKSHIIQVDVEAYPQPNIVWLKNNKTLTMESSSEF
TITNRNLSEIRYQTSLVLVRVKQEEGGFYTIRASNEDDVQELSFYLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCRNIKWCGNQGQPTQLLGNNSAEIGLHTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGSNSQDITLVPNALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTIKEDHV
QSHLSLSVESDGGYMDMSKDESLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYNIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNARLPPSSPTLYTAVHQNGGENDYIIPL
PDPKPEAMCDLPQEASISRASSMLNEANTSSTISCDSPLGPPQDEEPESDLQLGCQELAP
GHHEVEESFL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtccctctctgaaggcatcgctgcagctcctcatcctcactggtctgctggag
gtaacgtctgggggcagagggctgcacattgaacctgaagatgctgagctcgtccttagc
ctccacagcaccttctccctcgtgtgccatggggacagagagctggtctgggagcgggat
ggtcagcctctccctgccttgctggagcagaaggacaaggtcttcatcagcaacctcacc
ctcaggaacgtgacaggccgtcacacaggggagtatgcgtgctcctacagccccgaccag
gctccagagcgagcagagaggaaagccctttacatctatgttccagatccctccttagtt
tttctccccgcaatcaattctgaagagttcttcatcttcatcacgggctacacagaggcc
atcatcccatgccgtgtgaccaacccagagctgcaggtgaccctctatgaaaagaaagtg
gagaatcccattccggctgcttatgacccacaacagggcttcaaaggcttctttgaggac
aagacctactactgccaggcaatcgtggatgaccaagaggtggattcagacaccttctat
gtctacaggatccaggtctcatctgtgaatgtctccatcagtgcagtgcagaccatagtg
cgtcagggagaaaatgttaccctgatgtgcaccgtcagcggcaatgagctggtcaacttc
aactgggattatcctcgcaagcaggcagggaaggctgtggagccagtgaccgacttcctg
cccggatccacccatgacattcgttccatcctcatcatccagaatgcagagctagaggac
agcgggacttacgtctgcaatgtctctgagggctaccatgagaaaacagaccggaaagac
atcatggtccaagtgatcgagcgtggctttgtgcgcttccacactcacctgaacagcaca
gtgtacgctgaggtccacaagagccacatcatccaggtggatgtggaggcctacccacag
ccaaacatcgtgtggctgaagaacaacaagacgttgaccatggagagcagcagcgagttc
accatcaccaacaggaacctgtcagaaatcaggtaccagacgtctctggtcctggtgcgg
gtgaagcaggaggaaggaggattttacaccatccgagcttccaatgaggacgatgtgcaa
gagctgtccttctatctgcagataaatgtaccagccaaagtggttgatctcaaggagaac
agcagtgccagcagcggggagcagactgtaacgtgctctgctgaagggatgccccagcca
gagatcagctggtccacctgcagaaacatcaaatggtgcggcaaccaggggcagcccacc
cagctgctggggaacaactccgcagagatcggcctgcacaccaacgccacgtaccatgca
gagctgcaggtgtaccgtgtgaacagcaccctgcagctgcacagggtggatgaacccctg
ctcctgaggtgcactgtgcaaaacttcctgggctccaactcccaagacatcactctggtc
ccaaatgccttgccgttcaaagtggttatcatctctgtcatcctggccctgctggtcctc
actgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgctatgaaatc
cgctggaaggtgatcgagtcagtgagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccttatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actcttggctccggtgcctttggacgcgtggtggaggcaacagcacatggcctgagccat
tcacagtccaccatgaaagtggcggtcaagatgctcaagtccaccgcccggagcagcgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatt
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcactgagtactgc
cgttacggggacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctat
ggcgagaaggcccgccgggaggcagagctgtatgggaacaccatcaaggaggaccatgtg
cagagtcacctctccttgtctgtcgagagcgatgggggctacatggacatgagcaaggac
gagtctctggattatgtgcctatgtctgacatgaagggtgaagtcaagtacgctgacatc
gagtcctctaactatggcaccccatacgagctggacagctattccccatcagctcctgaa
agaacagaccgggtgacactgataaatgaatctccactcctcagctatatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcat
cgcgacctggctgccaggaacgtcctcatctgcgaggggaagctggtgaagatctgcgac
tttggtctggcaagggacatcatgagggattccaactatatctccaaaggcagcaccttc
ttgccccttaagtggatggccccggagagcatcttcaacaacctctacaccaccctgagt
gacgtgtggtcctttgggattcttctctgggagatattcactctaggagggactccctac
cctgaactgcctatgaatgaacagttctacaatgccatcaaacgtggctatcggatgtcc
aaacccacccacgcttctgatgaaatctacaatatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagctggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgct
gttgttcgcacaagacccacgatccccgggctgaacaacgccaggctccctcccagctcc
cccaccctctacactgccgtgcaccagaatgggggcgagaacgactacatcatccctctt
cccgaccccaagcctgaggcaatgtgcgatctccctcaggaggcctccatcagccgtgcc
agctctatgctgaatgaagccaacacatcatctacaatatcctgtgacagccccctgggc
cccccgcaggacgaggagccagaatctgacctgcagctgggctgccaggagctggccccg
gggcaccacgaggtggaggagagcttcctttag
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