KEGG   Neobacillus mesonae: CHR53_02470
Entry
CHR53_02470       CDS       T06691                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
nmk  Neobacillus mesonae
Pathway
nmk03030  DNA replication
nmk03410  Base excision repair
nmk03420  Nucleotide excision repair
nmk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHR53_02470
   03410 Base excision repair
    CHR53_02470
   03420 Nucleotide excision repair
    CHR53_02470
   03430 Mismatch repair
    CHR53_02470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmk03032]
    CHR53_02470
   03400 DNA repair and recombination proteins [BR:nmk03400]
    CHR53_02470
Enzymes [BR:nmk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CHR53_02470
DNA replication proteins [BR:nmk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CHR53_02470
DNA repair and recombination proteins [BR:nmk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CHR53_02470
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CHR53_02470
   MMR (mismatch excision repair)
    DNA ligase
     CHR53_02470
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CHR53_02470
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia HHH PTCB-BRCT BRCT_2 SpoOE-like 5_3_exonuc
Other DBs
NCBI-ProteinID: AZU60220
UniProt: A0A3Q9QRW4
LinkDB
Position
489875..491881
AA seq 668 aa
MDLQTAETKIEELRNLLNQYGYEYYVLDNPSVPDAEYDRLMQELLMLEEQFPELKSPDSP
TVRVGGAILDMFEKVEHRIPMLSLGNAFNEQDLRDFDRRVRQAVGDQVSYVCELKIDGLA
VSLRYEDGLFIQGATRGDGTIGEDITANLKTIKSIPLRLKEAVSIEVRGEAFMPKRSFEA
LNEVRKERGEEQFANPRNAAAGSLRQLDPKIAASRRLDVFLYGIGNPEAIRAVSHSGGLD
YLDHLGFKTNKERRKSKTIDEVIEFVHGWVEKRPHLPYEIDGIVIKVDSLAQQDELGTTA
KSPRWAIAYKFPAEEVVTTLLDIELSVGRTGVITPTAILTPVKVAGTTVQRASLHNEDLI
REKDIKIGDQVVVKKAGDIIPEVVNVLAEQRTGAEIDFHMPTDCPECESELVRLDGEVAL
RCINPKCPAQIREGLIHFVSRDAMNIDGLGEKVISQLFAEKLIGDVADIYKLTREQLLAL
ERMGEKSVSNLLAAIEASKNNSLEKLLFGLGIRHVGAKAAKTLAIEFGSMEKLAAASKED
LIAINEIGNKMADSIVSFFEQEEAGELIQELITAGVNMDYKGAKPVSAADSDSIFAGKTV
VLTGKLEVLTRNEAKEKIEALGGNVAGSVSKKTHLVIAGADAGSKLAKAQELGIEVWDEE
KLLEELNK
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggaccttcaaacagctgaaaccaaaatagaggaactgcgaaatctattaaaccaatat
ggttatgaatattatgtattagataatccatctgtaccggatgcggaatatgaccgcttg
atgcaggagctattgatgcttgaggaacagtttccagagctgaaatctccggattcacca
acagttcgggttggcggcgcgatacttgatatgtttgaaaaagtcgagcaccggattccg
atgttaagcttaggaaatgcctttaatgaacaggatttacgtgattttgaccgcagagtc
cgccaggcggtaggcgatcaagtttcctatgtgtgtgagcttaaaatagatgggcttgct
gtttcgttaagatatgaagacggtctgtttattcaaggtgccactcgcggtgacgggaca
atcggcgaggatattaccgccaacttaaagaccattaaatcaattccgctgcgattaaag
gaagccgtttcgattgaagtccgcggcgaggctttcatgccgaagcgctcgtttgaagca
ttgaatgaagtaagaaaagaacgcggcgaagagcagtttgccaacccaagaaatgcggcg
gccgggtcattaaggcagcttgatccgaaaattgctgcttcgaggcggctggatgtcttt
ttgtacggaataggcaaccccgaggccattagggcagtttcccatagcggcggtctggat
tatttagatcatcttggttttaaaacgaataaagaacggcgcaaaagtaagacgatcgac
gaagtgattgaatttgttcatggctgggttgaaaagcggccgcatcttccgtatgaaatt
gacggtattgttatcaaggtcgactccttggcacagcaggatgagttggggacaacggcc
aaaagtccgcgctgggcgattgcctataaatttcctgctgaagaagtggttacaaccctt
ttagatattgaactgagtgtaggcagaacgggtgttataacaccaactgcaattctgact
ccagttaaagttgccgggacaactgtacagcgcgcctcccttcacaacgaggatctgatt
cgggagaaggatatcaaaattggcgatcaggtagtcgttaaaaaggccggtgatataatt
ccggaagttgtaaatgttttagctgaacagcggacgggggcagaaattgatttccatatg
ccgacagattgtccggaatgtgaaagtgagcttgttcgtcttgacggtgaggttgcgctc
cgatgcattaatccaaaatgtccggcgcaaatccgcgagggactgatacattttgtttcc
cgcgatgcgatgaatattgacgggctgggggaaaaagtgatcagccagctgtttgcggaa
aaattaatcggtgatgtggctgatatttataagcttacccgcgagcagctactagcactt
gagcgaatgggcgaaaagtctgtttctaatttgttagcggctattgaggcttcgaagaac
aattcgcttgaaaaactgctgtttgggctcgggatccgtcatgtcggtgcgaaagcggca
aagacattggccattgaatttggttcgatggaaaagctggctgccgcttcgaaagaggat
ttaattgcaattaatgaaattggtaataaaatggccgattccattgtcagcttttttgag
caggaagaagctggtgagcttattcaggagttaattactgcgggggtaaacatggattat
aaaggggcaaaacctgtctcggcggctgattctgattctatttttgccggcaaaacagtt
gtccttaccggaaaacttgaggtattaacaagaaatgaagcgaaggaaaaaatcgaagcg
ctgggcggcaatgttgccggcagtgtcagcaaaaaaacacatttagtaattgccggtgcg
gatgctggctcgaagcttgccaaagcacaggagttaggaattgaagtgtgggatgaagag
aagctgctggaagaactaaataagtaa

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