Neisseria meningitidis M01-240149 (serogroup B): NMBM01240149_1427
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Entry
NMBM01240149_1427 CDS
T01930
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmm
Neisseria meningitidis M01-240149 (serogroup B)
Pathway
nmm03030
DNA replication
nmm03410
Base excision repair
nmm03420
Nucleotide excision repair
nmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMBM01240149_1427 (ligA)
03410 Base excision repair
NMBM01240149_1427 (ligA)
03420 Nucleotide excision repair
NMBM01240149_1427 (ligA)
03430 Mismatch repair
NMBM01240149_1427 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmm03032
]
NMBM01240149_1427 (ligA)
03400 DNA repair and recombination proteins [BR:
nmm03400
]
NMBM01240149_1427 (ligA)
Enzymes [BR:
nmm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMBM01240149_1427 (ligA)
DNA replication proteins [BR:
nmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMBM01240149_1427 (ligA)
DNA repair and recombination proteins [BR:
nmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMBM01240149_1427 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMBM01240149_1427 (ligA)
MMR (mismatch excision repair)
DNA ligase
NMBM01240149_1427 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMBM01240149_1427 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADY97992
LinkDB
All DBs
Position
1564247..1566772
Genome browser
AA seq
841 aa
AA seq
DB search
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKL
FRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHA
EMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIK
TVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQAENGQKPFANPRNAAAGSLRQL
DSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAF
YEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFISRAPRWAIAHKFPAEEALTIVEAIDV
QIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVR
VIFERRPMQETAVAVSDGIGHRQDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIER
EEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL
DIPTLQKMKETTDKTVAESDQTPSEGSSVGASGKHKKQPVKWAENILGGIESGKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQ
AMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQ
NDKALPADWQAWRSEPQNAALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTL
PTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLL
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactcaaaacataacactaactttaccaatcttcttaaaccgtctgatagt
gatataaaacaatttgccgcacaacacatccgccacctcaccgacctgctcaaccgctat
gcctacgaatactacaccctcgacgcgcccagcgtacccgatgccgaatacgacaaatta
ttccgcgagctcgaagcgttggaattaaaccatcccgagctcaaactgcccgacagtccg
acccagcgcgtcggcggcgagcctttagcgggatttgccgaagtgcgccacgaagtgccg
atgctgtcgctgaccaacgctttttccccgcaagatgaaaacggcgtgttcgaccatgcc
gaaatgtacgctttcgaccaacgcgtgcgcgacggtttggacggcggcaaacccgaatac
gttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattg
gtacaggcggcaacgcgcggcgacggcacaacgggcgaagacgttacccaaaacatcaaa
accgtcgccaacatccccctgcggctgcacggcgaaaatacgcccgaactcatcgaagta
cgcggcgaagtactgatgcaaaaagccgattttgccgccctcaataaaagacaagccgaa
aacgggcaaaaaccctttgccaatccgcgcaacgccgctgccggcagcctgcgccaactc
gattcgcgcatcactgcgcaacgcaaactgcactttttcccctactccgtcgcccgccag
caaggcggtttcgtcgcggaagaacacatccaagaactcgcctatttccaagcactcggc
ttcagtctgccaaatggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttt
tacgaacaaatgcagcaaaaacgccccgaactgccctacgaaatcgacggtatggtggtc
aaagtcaacagcttggcgcaacagcgcgaactcggcttcatctcacgcgcgccacgctgg
gcgattgcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtg
caaatcggcaggacgggcgcggtaacgccggttgcccgattacaacccgtattcgtcggc
ggcgtaaccgttaccaacgccaccctgcacaatcaggacgaagtttcccgaaaagacgtg
cgcgtcggcgataccgtcgtcgtgcgccgcgctggagacgtgattcccgaagtcgtgcgt
gtgatttttgaacgccgcccgatgcaggaaaccgccgttgctgtttcagacggcatcggg
catcggcaggacgatttgtttgccgaaacaccgtccgctaatcaaacccaatccgttccg
ctccacaagccctaccgcctgccgacccattgccccatctgccgcagcgaaatcgaacgc
gaagaaggcgaagccgtcgcccgatgcagcggcggtatgctttgtcaggcacaacgcgcg
caaggcttaatccacttcgcctcgcgcaaagccatggacatcgacggcttgggtgaaaaa
caaatcgaacagcttgtcgcccaagacctcgtccgccacttcgccgacctctaccgcctc
gatattccgaccctgcaaaaaatgaaagaaacgacggacaaaaccgttgccgaatcggat
caaacgccgtctgaaggcagttcggtcggcgcgtcgggcaaacataaaaaacaaccggtc
aagtgggcggaaaacatcctcgggggcatagaatccggcaaaacgcccgaactcgcgcgc
ttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctggcgcag
gcattcggcacattggaacgcgtccgccgcgcccccgaacccgtcctcgcctgcctgccc
gacatcggtacggtagtggcgcattccattgcccacttcttcgcccaagccgaacagcag
gcgatgatagacgaactgctcgccgcaggcgttgccccgcaaacccaagccgttaccatc
ccgcccgcccgccacgccgaaccgcaacgctggatcgcccgcctgcccgacttcaaaatt
agcgaaaacaaagcccaagccttatgggaactcgctggtaaaaacatagaaggtctacaa
aacgacaaagccctccccgccgactggcaagcatggcgcagcgaaccacaaaacgccgcc
ctactcgaaaacctgaaaaccttcttcgcgcaaatgccgtctgaagacgaggcggcgcaa
ggttcagacggcatcaataaagccgtagcaggcaaaacctttgtattaaccggcaccctg
cccacgctcaaacgcgaccaagcccaatccctaatcgaagccgcaggcggcaaagtttcc
ggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaagccgcgggcagcaagctg
gaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttaccctgctc
ggctga
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