Neisseria meningitidis 053442 (serogroup C): NMCC_0619
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Entry
NMCC_0619 CDS
T00633
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmn
Neisseria meningitidis 053442 (serogroup C)
Pathway
nmn03030
DNA replication
nmn03410
Base excision repair
nmn03420
Nucleotide excision repair
nmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMCC_0619 (ligA)
03410 Base excision repair
NMCC_0619 (ligA)
03420 Nucleotide excision repair
NMCC_0619 (ligA)
03430 Mismatch repair
NMCC_0619 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmn03032
]
NMCC_0619 (ligA)
03400 DNA repair and recombination proteins [BR:
nmn03400
]
NMCC_0619 (ligA)
Enzymes [BR:
nmn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMCC_0619 (ligA)
DNA replication proteins [BR:
nmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMCC_0619 (ligA)
DNA repair and recombination proteins [BR:
nmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMCC_0619 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMCC_0619 (ligA)
MMR (mismatch excision repair)
DNA ligase
NMCC_0619 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMCC_0619 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABX72816
UniProt:
A9M2U7
LinkDB
All DBs
Position
complement(634507..637032)
Genome browser
AA seq
841 aa
AA seq
DB search
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKL
FRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHA
EMYAFDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIK
TVSNIPLRLHGENTPELIEVRGEVLMLKADFVALNKRQAENGQKPFANPRNAAAGSLRQL
DSRITAQRKLHFFPYSVARQQDGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAF
YEHMQQKRPELPYEIDGMVVKVNSLAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDV
QIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVR
VIFERRPMRETAVAVSDGIGHRQDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIER
EEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL
DIPTLQKMKETADKTVAESDQMPSEGSSVGASGKHKKQPVKWAENILAGIEASKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQ
AMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPGFKISENKAQALWELAGKNIEGLQ
TDKALPTDWQAWRSEPQNAALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTL
PTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLL
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactcaaaacataacactaactttaccaatcttcttaaaccgtctgatagt
gatataaaacaatttgccgcacaacacatctgccgcctcaccgacctcctcaaccgctac
gcctacgaatactacaccctcgacgcgcccagcgtacccgatgccgaatacgacaaattg
ttccgcgaactcgaagcgttggagttaaaccatcccgagctcaaactgcccgacagcccg
acccagcgcgtcggcggcgagcctttggcgggatttgccgaagtacgccacgaagtgccg
atgctgtcgctgaccaacgctttttccccgcaagatgaaaacggcgtgttcgaccatgcc
gaaatgtacgccttcgaccaacgcgtgcgcgacggcttggacggcggcaatcccgaatac
gttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattg
gtgcaggcggcaacgcgcggcgacggcacgacgggcgaagacgttacccaaaacatcaaa
accgtatccaacatccccttgcggctgcacggcgaaaatacgcccgaactcatcgaggta
cgcggcgaagtgctgatgctcaaagccgattttgtcgccctcaataaaagacaagccgaa
aacgggcaaaaaccctttgccaatccgcgcaacgccgccgccggcagcctacgccaactc
gattcgcgcatcaccgcgcaacgcaaactgcactttttcccctactccgtcgcccgccag
caagatggtttcgtcgcggaagaacacatccaggaactcgcctatttccaagcactcggc
ttcagtctgcccaatggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttt
tacgaacacatgcagcaaaaacgccccgaactgccctacgaaatcgacggcatggtcgtc
aaagtcaacagcttggcgcaacagcacgaactcggcttcatctcccgcgcgccgcgttgg
gcggttgcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtg
caaatcggcaggacgggcgcggtaacgccggttgcccgattacagcccgtattcgtcggt
ggcgtaactgttaccaacgccaccctgcacaatcaggacgaagtatcgcgcaaagacgtt
cgcgtcggcgataccgtcgtcgtacgccgtgccggagacgtgattcccgaagttgtgcgc
gtgatttttgaacgccgcccgatgcgggaaaccgccgttgccgtttcagacggcatcggg
catcggcaggacgatttgtttgccgaaacaccgtccgccaatcaaacccaatccgttccg
ctccacaagccctaccgcctgccgacccactgccccatctgccgcagcgaaatcgaacgc
gaagaaggcgaagccgtcgcccgatgcagcggcggtatgctttgtcaggcacaacgcgcg
caaggcttaatccacttcgcctcgcgcaaagcgatggacatcgacggcttgggtgaaaaa
caaatcgaacagcttgtcgcgcaagacctcgtccgccacttcgccgatctctaccgcctc
gacatcccgaccttgcaaaaaatgaaggaaacagcggacaaaaccgttgccgaatcggat
caaatgccgtctgaaggcagttcggtcggcgcgtcgggcaaacataaaaaacaaccagtc
aagtgggcggaaaacatcctcgcaggcatagaagccagcaaaacgcccgaactcgcccgc
ttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctggcacag
gcattcggcacattggaacgcgtccgccgcgcccccgaacccgtcctcgcctgcctgccc
gacatcggtacggtagtggcgcgttccattgcccacttcttcgcccaagccgaacagcag
gcgatgatagacgaactgctcgccgcaggcgttgccccgcaaacccaagccgttaccatc
ccgcccgcccgccacgccgaaccgcaacgctggatcgcccgcctgcccggtttcaaaatc
agcgaaaacaaagcccaagccttatgggaactcgccggcaaaaacatagaagggctgcaa
accgacaaagccctccccaccgactggcaggcgtggcgcagcgaaccacaaaacgccgcc
ctgctcgaaaacctgaaaaccttcttcgcgcaaatgccgtctgaagacgaggcggcgcaa
ggttcagacggcatcaataaagccgtggcgggcaaaaccttcgtgttaaccggcaccctg
cccaccctcaaacgcgaccaagcccaatccctaatcgaagccgcaggcggcaaagtttcc
ggcagcgtgtccaaaaaaaccgattacgtcgtcgccggagaagccgcgggcagcaagctg
gaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttaccctgctc
ggctga
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