Neisseria meningitidis M01-240355 (serogroup B): NMBM01240355_0664
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Entry
NMBM01240355_0664 CDS
T01947
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nms
Neisseria meningitidis M01-240355 (serogroup B)
Pathway
nms03030
DNA replication
nms03410
Base excision repair
nms03420
Nucleotide excision repair
nms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMBM01240355_0664 (ligA)
03410 Base excision repair
NMBM01240355_0664 (ligA)
03420 Nucleotide excision repair
NMBM01240355_0664 (ligA)
03430 Mismatch repair
NMBM01240355_0664 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nms03032
]
NMBM01240355_0664 (ligA)
03400 DNA repair and recombination proteins [BR:
nms03400
]
NMBM01240355_0664 (ligA)
Enzymes [BR:
nms01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMBM01240355_0664 (ligA)
DNA replication proteins [BR:
nms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMBM01240355_0664 (ligA)
DNA repair and recombination proteins [BR:
nms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMBM01240355_0664 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMBM01240355_0664 (ligA)
MMR (mismatch excision repair)
DNA ligase
NMBM01240355_0664 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMBM01240355_0664 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADY99206
LinkDB
All DBs
Position
complement(722471..724996)
Genome browser
AA seq
841 aa
AA seq
DB search
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKL
FRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHA
EMYAFDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNVK
TVANIPLRLHGENTPELIEVRGEVLMQKADFATLNKRQAENGQKPFANPRNAAAGSLRQL
DSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYFQELGFSLPNGNFGCFKNIDEVLAF
YEQMQQKRPELPYEIDGMVVKVNSLAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDV
QIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVR
VIFERRPMRETAVAVSDGIGHRQDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIER
EEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL
DIPTLQKMKEAADKTVAESDQMPSEGSSVGASGKHKKQPTKWAENILAGIESGKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQ
AMIDELLAAGVAPQAQAVSLPAAQYAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQ
TDKSLPADWQAWRSEPQNAALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTL
PTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLL
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactcaaaacataacactaactttaccaatcttcttaaaccgtctgatagt
gatataaaacaatttgccgcacaacacatccgccacctcaccgacctgctcaaccgctat
gcctacgaatactacaccctcgacgcgcccagcgtacccgatgccgaatacgacaaatta
ttccgtgaactcgaagcgttggaattaaaccatcccgagctcaaactgcccgacagcccg
acccagcgcgtcggcggcgagcctctggcgggatttgccgaagtacgccacgaagtgccg
atgctgtcgctgaccaacgccttttccccgcaagatgaaaacggcgtgttcgaccatgca
gaaatgtacgctttcgaccaacgcgtgcgcgacggcttggacggcggcaatcccgaatac
gttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattg
gtgcaggcggcaacgcgcggcgacggtacgacgggcgaagacgttacccaaaacgtcaaa
accgtcgccaacatccccttgcggctgcacggcgaaaatacgcccgaactcatcgaagta
cgcggcgaagtgctgatgcaaaaagccgattttgccaccctcaataaaagacaagccgaa
aacgggcaaaaaccctttgccaacccacgcaacgccgccgccggcagcctgcgccaactc
gattcacgcatcactgcgcaacgcaaattgcactttttcccctactccgtcgcccgtcag
caaggcggtttcgtcgcggaagagcacatccaagaactcgcctatttccaagaactcggc
ttcagcctgcctaacggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttt
tacgaacaaatgcagcaaaaacgccctgagctaccctatgaaatcgacggcatggtcgtc
aaagtcaacagcttggcgcaacagcacgaactcggcttcatctcccgcgcgccgcgttgg
gcggttgcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtg
caaatcggcaggacgggcgcggtaacgccggttgcccgattacaacccgtattcgtcggt
ggcgtaactgttaccaacgccaccctgcacaatcaggacgaagtatcgcgcaaagacgtt
cgcgtcggcgataccgtcgtcgtacgccgtgccggagacgtgattcccgaagttgtgcgc
gtgatttttgaacgccgcccgatgcgggaaaccgccgttgccgtttcagacggcatcggg
catcggcaggacgatttgtttgccgaaacaccgtccgctaatcaaacccaatccgttccg
ctccacaagccctaccgcctgccgacccattgccccatctgccgcagcgaaatcgaacgc
gaagaaggcgaagccgtcgcccgatgcagcggcggtatgctttgtcaggcacaacgcgcg
caaggcttaatccacttcgcctcgcgcaaagcgatggacatcgacggcttgggtgaaaaa
caaatcgaacagcttgtcgcccaagacctcgtccgccacttcgccgacctctaccgcctc
gatattccgaccctgcaaaaaatgaaggaagcggcggacaaaaccgttgccgaatcggat
caaatgccgtctgaaggcagttcggtcggcgcgtcgggcaaacataaaaaacaaccgacc
aagtgggcggaaaacatcctcgcaggcatagaatccggcaaaacgcccgaactcgcccgc
ttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctggcacag
gcattcggcacattggaacgcgtccgccgcgcccccgaacccgtcctcgcctgcctgccc
gacatcggtacggtagtggcgcgttccattgcccacttcttcgcccaagccgaacagcag
gcgatgatagacgagctgctcgccgcaggcgttgccccgcaagcccaagccgtcagcctg
cctgccgcacaatatgccgaaccgcaacgctggattgcccgcctgcccggtttcaaaatt
agcgaaaacaaagcccaagccttatgggaactcgccggcaaaagtatagagggtctgcaa
accgacaaatccctccccgccgactggcaagcatggcgcagcgaaccacaaaacgccgcc
ctactcgaaaacctgaaaaccttcttcgcgcaaatgccgtctgaagacgaggcggcgcaa
ggttcagacggcatcaataaagccgtagcgggcaaaaccttcgtgttaactggcacactg
cccaccctcaaacgcgaccaagcccaatccctaatcgaagccgcaggcggcaaagtttcc
ggcagcgtgtccaaaaaaaccgattacgtcgtcgccggagaagccgcgggcagcaagctg
gaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttaccctgctc
ggctga
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